KEGG   Ricinus communis (castor bean): 8286743
Entry
8286743           CDS       T01087                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
rcu  Ricinus communis (castor bean)
Pathway
rcu03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rcu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    8286743
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rcu03400]
    8286743
DNA repair and recombination proteins [BR:rcu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     8286743
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 8286743
NCBI-ProteinID: XP_002511977
UniProt: B9RE38
LinkDB
Position
1:complement(2768937..2777386)
AA seq 936 aa
MDEDNKLPELKLDAKQAQGFLSFFKTLPHDPRAVRVFDRRDYYTSHGENATFIAKTYYHT
TTALRQLGSGPDGLSSVSISKNMFETIARDLLLERTDHTLELYEGSGSNWRLVKSGTPGN
LGSFEDVLFANNEMQDSPAVAAVIPNFRENGCSIGLGYVDLTKRILGLAEFLDDSHFTNL
ESALVALGCKECLLPIESGKSIECRTLHDALTRCGVMLTERKKNEFKTRDLVEDLGRLVK
GSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTIRKYNLDSYMRLDSAAMRAL
NVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAFVEDT
ALRQDLRQHLKRISDIERLVHNLEKRRAGLQHIVKLYQSSIRLPYIRGALDKYDGQFSSL
IKERYLDPLESLTDDDHLNKFIALVETSVDLDQLDNGEYLISPSYDPALSALKDEQESLE
CQIHNLHKQTAQDLDLPQDKGLKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLETRKD
GVKFTNTKLKKLGDQYQKIVEEYKNCQKELVNRVVQTAATFSEVFKSLAGLLSQLDVLLS
FADLATSCPTPYTRPDITPSDVGNIILEGSRHPCVEAQDWVNFIPNDCKLIRGESWFQII
TGPNMGGKSTFIRQVGVNILMAQVGSFVPCDKASISVRDCIFARVGAGDCQLRGVSTFMQ
EMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVQVIKAPTLFATHFHEL
TGLADEKAEPHMKQIAGVANYHVSAHIDSSNRKLTMLYKVEPGACDQSFGIHVAEFANFP
ESVVALAREKAAELEDFSPNAIVSNDTTEKVGSKRNRKCDPDDVSRGAARAHKFLKEFSD
LPLETMDLKEALQQVSKLKEGLEKDAANCQWLKQFF
NT seq 2811 nt   +upstreamnt  +downstreamnt
atggatgaagataacaagctacctgagctcaagctagatgctaaacaggctcaggggttt
ctctccttcttcaaaactctacctcatgacccaagagcagtgcgggtattcgataggcgg
gactattacacatcacatggtgaaaatgcaaccttcattgcaaagacatattaccatacg
actactgctttacgacaattgggcagtggacctgatggcctttccagtgtgagtattagt
aagaatatgtttgaaacaattgccagagatcttttactggagagaacagatcatacactt
gagctctatgagggcagtggatcaaattggagattggtgaaaagtggaactcctggaaat
ctaggcagttttgaagatgttttgtttgccaacaatgaaatgcaggattcccctgcggtt
gctgcagtcatcccgaactttcgtgaaaatgggtgcagtattgggctaggttatgttgat
ttaacaaagagaattcttggattggccgaatttcttgatgatagtcactttacaaatttg
gagtcagccttggttgcccttggttgtaaggaatgccttttgcccattgagagtggtaaa
tccattgaatgtagaactttgcatgatgcactgactagatgcggtgtgatgttaactgag
agaaagaaaaatgagttcaaaacaagggatttggtggaggatctcggtaggcttgtaaaa
ggttccattgaaccagttagagatttagtttctggttttgaatttgcacctggtgcttta
ggagcattactctcttatgcagaattactggcggatgagagcaattatggaaattataca
atcagaaagtacaatcttgacagctacatgagactggattctgctgccatgagggctctt
aatgtccttgagagcaaaactgatgcaaacaaaaattttagtttatttggtcttatgaat
agaacgtgcactgctgggatgggaaaaagattgcttcacatgtggctaaaacaaccttta
ctagatgtaaatgaaatcaactccagactggacttggtacaagcttttgtggaggatact
gcacttcgccaagatctgaggcagcatttgaaaagaatttcggacattgagcgcctagta
cacaatcttgagaaaagaagagctggtttgcagcatattgtgaaactttatcagtcaagt
ataagactgccatacattaggggtgctctggacaagtatgatggtcaattttcatccttg
atcaaggaaaggtatttggatcctctcgagtcattgaccgatgatgatcacttgaacaag
tttattgctcttgtagaaacttctgttgaccttgatcaacttgacaatggggagtatttg
atttcaccaagttatgacccagcactatctgcgctgaaagatgaacaggagtcattggag
tgccaaatacacaatttgcataaacaaactgctcaggatcttgatcttcctcaagataaa
ggattaaagttagataagggaacccaatttggacatgtctttagaattacgaagaaagag
gagccaaaaataaggaaaaagctgaccacccaatttattgtcctcgaaacccgaaaagat
ggagtgaaattcacaaacacaaaacttaagaagttaggggaccagtaccaaaagatagta
gaggaatacaagaattgtcaaaaagagctggtcaatcgagttgttcaaactgcggcaact
ttctctgaggtgtttaaatctttggctggcttgctgtctcaattggatgtcttactcagt
tttgctgatttggctactagttgtccaaccccctacacaagacctgacataactccatct
gatgttggaaatattatattggaaggaagtagacatccttgtgtggaagcccaagactgg
gtgaattttataccaaatgattgtaaacttatcaggggagaaagttggttccaaataatt
acagggcctaatatgggtggaaaatctacatttattcggcaagttggtgtgaatatttta
atggcacaagttggttcctttgttccttgcgacaaggctagcatttcggttcgtgattgc
atttttgctcgtgttggtgctggggattgccaactacgtggagtttctacctttatgcaa
gaaatgcttgaaactgcttcaatcctgaaaggagctacagataagtcattgataataatt
gatgaattaggccgagggacatcaacttatgatggttttggtttagcatgggccatatgc
gaacaccttgttcaagtgattaaagcacctaccttatttgcaacccactttcatgaactg
actggtttagctgatgaaaaagctgagccccatatgaagcaaattgctggtgtagcaaac
tatcatgtcagtgcacacattgactcatcaaatcgcaagctgactatgttatacaaggtt
gaaccgggggcttgcgatcaaagttttggtatacacgttgcagaattcgcaaactttcct
gaaagtgttgttgcccttgctcgagaaaaggcagctgagttggaagatttctcacctaat
gctattgtttcaaatgatactacagaaaaggttgggtccaaacgaaatagaaaatgtgat
cctgatgatgtgtctagaggtgcagctcgggctcacaaatttctgaaggagttctctgat
ttgccactagagactatggatttgaaggaggctctccagcaagtaagcaagctgaaagag
ggcttagagaaggatgcagcaaattgccagtggcttaagcaattcttctag

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