Roseobacter denitrificans: RD1_0047
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Entry
RD1_0047 CDS
T00376
Name
(GenBank) outer membrane porin, putative
KO
K08720
outer membrane protein OmpU
Organism
rde
Roseobacter denitrificans
Pathway
rde01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RD1_0047
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_0047
Transporters [BR:
rde02000
]
Other transporters
Pores ion channels [TC:
1
]
RD1_0047
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Porin_4
Motif
Other DBs
NCBI-ProteinID:
ABG29785
RoseoBase:
RD1_0047
UniProt:
Q16E08
LinkDB
All DBs
Position
complement(44919..45881)
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AA seq
320 aa
AA seq
DB search
MKKILMASTMLVATAGMAAADITFDGFGRFGIVYNDGADDAGDRSDTQLDQRFRLNVVGT
TETDGGVEFRARLRLESNDNGDGQGSGGGNVVEAPEFGVRAGGFNVFLGNTSDLIDSGDV
VDYYGNGIGLTDFAETSSNFVTGSIISGINGGDEIDPTIKTSYTVGDFTFGASYSDNALD
SATEEYQIGAGYKFGNFGVGAAFGNVDGGDFDDTDFWALSFNGDLGSFAFSLLAADSDDQ
DSVALGASVAVPVGAATDVRFVVSDNGLDSDDSFAATKGDDTAYAVGFRHSLGGGVRLQG
GIGENSLGDTVGDLGVIFNF
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagattcttatggcatccacgatgcttgtcgcgacagccggaatggccgccgcc
gacatcacgttcgacggcttcggtcgcttcggtatcgtttacaacgacggcgctgacgat
gcaggcgatcgcagcgacacacagctggaccagcgtttccgcctgaacgttgttggtaca
actgaaacagacggcggcgtcgagttccgcgcacgtctgcgtttggaatccaacgacaac
ggcgacggtcaaggttccggcggcggcaacgtcgtagaagcgcctgaatttggcgtacgc
gccggcggcttcaacgtgttccttggcaacacatccgacctgatcgactccggcgacgtt
gttgattactacggtaacggcatcggccttacagactttgctgaaacatccagcaacttc
gtaaccggtagcatcatcagcggcatcaacggtggcgacgagatcgatccaacgatcaaa
accagctacaccgttggcgatttcacattcggtgcgtcttattctgacaacgcgctggac
tcagcaacagaagagtaccagatcggtgccggctacaaattcggcaacttcggtgtcggt
gctgcctttggtaacgttgatggcggtgacttcgacgatacggacttctgggcgttgtcc
ttcaacggcgacctcggctccttcgcattctcgctgcttgcagccgatagcgatgatcaa
gactccgtagcgcttggtgcatccgttgccgtaccagtcggtgcagcaacagacgttcgt
ttcgttgtatccgataacggcctcgacagcgacgactcgttcgcagcgaccaaaggtgac
gacactgcatacgccgtcggcttccgtcacagcctcggtggcggtgtacgcctccaaggt
ggtatcggtgaaaacagcctcggcgataccgttggtgacttgggtgtgatcttcaacttc
taa
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