Roseobacter denitrificans: RD1_1502
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Entry
RD1_1502 CDS
T00376
Name
(GenBank) branched-chain amino acid ABC transporter, periplasmic binding protein, putative
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
rde
Roseobacter denitrificans
Pathway
rde02010
ABC transporters
rde02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RD1_1502
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD1_1502
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rde02000
]
RD1_1502
Transporters [BR:
rde02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
RD1_1502
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
Motif
Other DBs
NCBI-ProteinID:
ABG31135
RoseoBase:
RD1_1502
UniProt:
Q16A58
LinkDB
All DBs
Position
1427247..1428398
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AA seq
383 aa
AA seq
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MKKSIITALACTALVTPAFAQDTIKIGLGVPMTGDYAPYSEWQGARCMAEMINADGGVDG
KMIEILVQDSGADTQTAISLAQKFLDEGAVMLGTIPFSDTMIPVAQIAQGYGVSIFQPQS
TQVEMHAGIVDNFFTGVSPDPFTATAAANYALEKGVKNVVLLASDEGGSWSAKTPLWFGE
VIEAGGGKVLSTLNFSFGTSDWSPQIAEMRALGEEVDAVYISSIMPDVGVLVRQLRSAGI
DAWVVGSDGFDDPSLDAIGTDDPSILDKVFFATLAPSQADSAVVQFMADCKEMGIDVPGL
FPATGADTVKALAWAVEQSGSVDPETIAQTIRDADSIPVLTVDSISFKETRTYAQRTIPV
IGFKDGKRVLISNEIPENVPADW
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtccataatcaccgcgctggcatgcaccgcattggtgacacccgcctttgcc
caagacaccatcaagattggcctcggcgtgccgatgaccggtgactatgcgccctattcc
gaatggcagggggcccgctgcatggctgaaatgatcaacgcagatggtggcgttgacggc
aagatgatcgagattctggtgcaggattccggtgctgacacgcagaccgcgatctctctg
gcgcagaagtttctggacgaaggggcggtcatgctgggcacgatcccgttttccgacacg
atgatacctgtcgcccagatcgcgcagggctatggcgtgtcgatctttcagccacaatcg
actcaggtcgagatgcacgcaggcatcgtcgataacttctttaccggtgtttcacctgat
cctttcaccgcgacagcagccgccaactatgcgctggaaaaaggcgtcaagaacgtcgtc
ctgctggcatctgacgaagggggcagctggtctgccaaaacgccgctttggttcggcgag
gtcatcgaagcaggtggcggcaaggtcctgagcacgctgaatttcagctttggcacatct
gactggtccccccagatcgcggaaatgcgcgcactgggggaagaggtggacgcggtctat
atctcttcgatcatgccggatgtcggcgtcttggtgcgccagttgcgcagtgctggcata
gatgcctgggtcgtgggctcagatggttttgatgacccgtcgctggacgccatcggcacg
gatgatccgtcgatccttgacaaggtcttctttgccacgctcgcgccaagccaggcggac
agcgcggtcgtccagttcatggctgattgcaaagagatgggcatcgatgtgccgggtctt
ttcccggcgacgggcgcggatacggtcaaggcgctggcctgggcggtggagcaatcgggc
agcgtggatcctgagaccatcgcccaaacgatccgcgacgcggacagtattccggtgctg
accgtggatagcatttcgttcaaggagaccaggacatacgcgcagcgcaccattcccgtc
atcgggtttaaagatggcaagcgcgtgctgatttcgaacgaaatccctgaaaacgtgccg
gccgactggtaa
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