Roseobacter denitrificans: RD1_1565
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Entry
RD1_1565 CDS
T00376
Symbol
nirS
Name
(GenBank) nitrite reductase
KO
K15864
nitrite reductase (NO-forming) / hydroxylamine reductase [EC:
1.7.2.1
1.7.99.1
]
Organism
rde
Roseobacter denitrificans
Pathway
rde00910
Nitrogen metabolism
rde01100
Metabolic pathways
rde01120
Microbial metabolism in diverse environments
Module
rde_M00529
Denitrification, nitrate => nitrogen
Brite
KEGG Orthology (KO) [BR:
rde00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RD1_1565 (nirS)
Enzymes [BR:
rde01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.2 With a cytochrome as acceptor
1.7.2.1 nitrite reductase (NO-forming)
RD1_1565 (nirS)
1.7.99 With unknown physiological acceptors
1.7.99.1 hydroxylamine reductase
RD1_1565 (nirS)
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GFIT
Motif
Pfam:
Cytochrom_D1
Cytochrome_CBB3
Cytochrom_C
Cytochrom_C550
SH3_6
Motif
Other DBs
NCBI-ProteinID:
ABG31193
RoseoBase:
RD1_1565
UniProt:
Q16A00
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All DBs
Position
1488045..1489742
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AA seq
565 aa
AA seq
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MSLSATLAFAQDKPADHGDDASAAYQPSLTTLGQIQVEIPGRKPGDPVMTPSEYQDANTI
YFQRCAGCHGVLRKGATGKALTTDITRPNGFEYLRDFITYGSPAGMPNWGTSGDMTEEQV
DAMARYLLLEPAVPPEWGMAEMRDSWKVIVAPEDRPTEKMNDIDIDNLFSVTLRDAGEIA
LIDGASYEIKTIIETGYAVHISRISASGRYLFVIGRDAKVVMIDLWMETPGPVAEIKVGS
EARSVETSKFEGYEDQYAIAGAYWPPQFVIMDGDTLEPLRIKSTRGMTYDEQDFHPEPRV
AAILGSHYKPEFLVNVKETGKIMMVDYSDIDALKITEINAERFLHDGGLDSTQRYFLTAA
NARGKIVVIDTKESKKVAVIETEGETPHPGRGANINHPTYGPVWATSHLGDDTVALIGTD
PEGNPDHAWKMVQQLYALGGGSLFVKSHPTSNHLYVDATLNPDAETSGSVAVFKIDELGQ
EEPEYTVLPLVEWAGIAEGQPRVVQGEFNQAGNEIWFSIWNAADLESAIVVVDDKTLEMK
HVIKDERLVTPTGKFNVFNTRADVY
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgctgtctgccacattggcgttcgcacaggacaagcctgcggatcacggcgatgat
gcgtccgctgcctaccagccgtccctgacaacactgggtcagattcaggtcgaaattccg
ggtcgcaagcccggtgatccggtcatgacgcctagcgaatatcaggatgcgaacacgatc
tatttccagcgctgtgcgggctgccacggggttctgcgcaaaggcgcgacgggcaaggcg
ctgaccacagacatcacacgtccgaacgggtttgaatacctgcgcgacttcatcacctat
ggctcgcctgcgggcatgcccaactggggcacctcgggcgacatgaccgaagagcaggtc
gatgccatggcgcggtatctgctgctggagcccgctgtgccgccggaatggggcatggcg
gagatgcgcgacagctggaaagtgatcgtcgcccccgaagaccggcccaccgaaaagatg
aacgacatcgacatcgacaacctgttctcggtcacgctgcgggatgcgggcgagatcgcg
ctgatcgacggcgcgagctacgagatcaagacgatcatcgaaaccggctacgcggttcac
atcagccggatttccgcatcgggccgctatctctttgtgatcggtcgggacgccaaggtc
gtgatgattgatttgtggatggaaacacccggtccggtggctgaaatcaaggtcggatcc
gaggcgcggtcggtcgagacttcgaaattcgaaggatacgaggatcaatacgccatcgcc
ggggcctattggccgccacaattcgtcatcatggacggtgacacgctggagccactgcgc
atcaaatccacgcgcggcatgacctatgacgagcaggatttccaccccgaaccccgcgtc
gcggcgatcctcggatcacactacaagcccgagttccttgtgaacgtgaaagaaaccggc
aagatcatgatggtggattattccgacatcgacgcgctgaaaatcactgagatcaacgcg
gagcgcttcctgcatgatggcggtctggacagcacgcagcgctacttcctgacggcggcg
aatgcccgtggcaagatcgtcgtgatcgacaccaaggaaagcaagaaggtcgccgtgatc
gagaccgaaggcgagacaccgcaccccggtcgtggcgccaatatcaaccaccctacatac
ggacccgtgtgggcaacatcgcaccttggggatgatacggttgcattgatcgggacagac
cccgaaggcaacccggatcacgcctggaaaatggtgcagcagctttacgcactgggtggt
gggtcgctcttcgtgaaatcgcatccgacgtcgaaccacctctatgtggatgcgacgctg
aacccggatgcggaaacgtcgggctcggtcgcggtcttcaagatcgacgaattgggtcag
gaagagccggaatacaccgttctgccgctggttgaatgggccgggattgccgaaggacag
ccccgcgttgtgcagggcgagttcaatcaggccggtaacgagatctggttctcaatctgg
aacgccgctgatctggaatcggccatcgttgtggtcgacgacaagaccctcgaaatgaag
cacgtcatcaaggacgaacgcctggtcacaccgaccggcaagttcaacgtcttcaacacc
cgcgcggatgtctactga
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