Roseobacter denitrificans: RD1_2462
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Entry
RD1_2462 CDS
T00376
Name
(GenBank) RNA polymerase sigma factor, putative
Organism
rde
Roseobacter denitrificans
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF134
HTH_23
Xre-like-HTH
HTH_17
Motif
Other DBs
NCBI-ProteinID:
ABG32028
RoseoBase:
RD1_2462
UniProt:
Q166R5
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Position
complement(2348777..2349601)
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AA seq
274 aa
AA seq
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MASTSPTFFEFYGNQTHRTRVWFPCAHQIFRKDPTYGSGRSGRQDLRIHRQEPEADLSTR
NRARHSRPVHQSDRTVTRKRCINRQQQRRQKSMTDPRDEIVEHLRTLRAFALSLTRNTAM
ADDMVQDTIEKAWRNIDKFEAGTNMRAWLFTILRNTYYSNRRRAKREVADPEGAMVEQLS
EKPAHDGRLHMTDFRAAFTQLPDEQREVLLLVGASGFSYEEAAEMCGVAVGTIKSRVNRG
RKRLAELMDVNEDQPMELTDAHTVAVVAAGVTAA
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgacatctccaactttttttgaattctatgggaaccaaacgcaccggacgcgc
gtttggttcccatgtgcacatcaaatttttcgaaaggatcccacttatggctcgggacga
tcaggcaggcaagacctccgaattcatagacaagaacctgaagcagatctttcaacaaga
aatagagcgcgacattccagaccggttcaccaatctgatcgaacagttacgcgcaaaaga
tgcatcaaccgacaacagcagcggcggcaaaaaagtatgacagatcccagagacgagatc
gttgagcacctcagaacgctgcgggccttcgcgctcagcctgacgcggaacacggcgatg
gcagatgatatggtgcaggatacgatcgaaaaggcctggcgcaacatcgataagttcgag
gcaggcaccaacatgcgcgcgtggcttttcaccattctgcgcaacacctattattccaac
cgtcgccgcgccaagcgcgaggtcgctgacccggaaggtgcaatggttgaacaattgtct
gagaagcccgcacatgacgggcgtctgcacatgacggattttcgcgccgcattcacgcaa
ctgcccgatgaacaacgcgaggttctgttacttgtgggggcctctggcttttcctacgag
gaagcagcagaaatgtgcggcgtcgctgtcggtacgataaaaagccgcgtgaaccgtggc
cgcaaacggctggcggaactgatggatgtcaatgaggatcaacccatggagcttacggac
gcccacacggtcgcagttgtcgcggcgggtgtgacggctgcatga
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