KEGG   Roseobacter denitrificans: RD1_3351
Entry
RD1_3351          CDS       T00376                                 
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rde  Roseobacter denitrificans
Pathway
rde00470  D-Amino acid metabolism
rde00550  Peptidoglycan biosynthesis
rde01100  Metabolic pathways
rde01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rde00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RD1_3351 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RD1_3351 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RD1_3351 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rde01011]
    RD1_3351 (ddlB)
Enzymes [BR:rde01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RD1_3351 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:rde01011]
 Precursor biosynthesis
  Amino acid ligase
   RD1_3351 (ddlB)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N NAD_binding_8 ATP-grasp_4 ATPgrasp_ST
Other DBs
NCBI-ProteinID: ABG32849
RoseoBase: RD1_3351
UniProt: Q163J4
LinkDB
Position
complement(3218192..3219190)
AA seq 332 aa
MTVNRRKSRTTKNMTGPEWAHTRGTKVGQSSRTPPKVAVLLGGPSVEREVSLSSGQACAA
ALRDEGYDVVEIDAGHDLGARLIDAGPDAVLNCLHGRWGEDGCVQGLLEWMGVPYSHSGV
LASALAMDKQRSKDAFVAAGLPVVPSVIAKAADVRMGHVMQPPYVVKPNNEGSSVGVYLV
HEAANGPPQLSEDMPQEVMVEAFAPGRELTTTVVGDRALTVTDIVTDGWYDYDAKYKPGG
SHHVVPADIPADIFDLCMDYALRAHHALGCRGVSRTDFRWDETKGAAGLILLETNTQPGM
TATSLTPEQAAVTGMTFGKLCAWMVEDASCDR
NT seq 999 nt   +upstreamnt  +downstreamnt
ttgacggtgaaccggcgcaaaagtcggacaactaaaaacatgacgggccctgaatgggct
cataccagaggcaccaaggtgggtcagtcgagcaggacacccccgaaagtggcagtatta
ttgggcggaccttcggttgaacgcgaggtgtcgctgtccagtgggcaagcctgcgctgcc
gctttgcgggacgaaggatatgatgtcgtcgaaatcgacgcgggccatgaccttggcgcg
cgcctgatcgacgcaggcccggatgccgtcttgaattgcttgcatggccggtggggcgag
gatggctgcgtgcagggcctgctggagtggatgggcgtgccctacagccactccggtgtt
ttggcctccgccctcgcgatggacaagcagcgtagcaaggacgcattcgttgcggcgggt
ttgcccgttgtgcccagtgtgattgccaaggccgctgatgtgcgcatgggccacgtgatg
cagcccccctatgtggtcaaacccaacaatgaaggctcctccgtgggcgtttacctcgtt
cacgaggcggcgaacggcccgccgcagctctcggaagatatgccgcaggaggtcatggtc
gaagccttcgcgccggggcgtgaattgaccacgacggttgtgggggaccgtgcgctgacc
gtcaccgacatcgtcacagatgggtggtatgactatgatgccaaatacaaacccggtggg
tcccatcacgttgtgccggcggatattcctgctgatatattcgatctgtgcatggactac
gcgctgcgcgcccatcacgccttgggctgtcgcggtgtcagccgcacggatttccgatgg
gacgaaacaaagggtgctgcgggcctgatcctgctggagacaaatacccagccgggtatg
acggccacgtcgcttacgcccgagcaggcggcggtcacgggcatgacctttggcaagctc
tgcgcgtggatggtggaggacgcctcatgcgaccgttga

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