Rhizorhabdus dicambivorans: CMV14_21185
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Entry
CMV14_21185 CDS
T05084
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
rdi
Rhizorhabdus dicambivorans
Pathway
rdi00470
D-Amino acid metabolism
rdi00550
Peptidoglycan biosynthesis
rdi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CMV14_21185 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CMV14_21185 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rdi01011
]
CMV14_21185 (murD)
Enzymes [BR:
rdi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CMV14_21185 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rdi01011
]
Precursor biosynthesis
Amino acid ligase
CMV14_21185 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
ADH_zinc_N
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
ATE66618
UniProt:
A0A2A4G0B0
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All DBs
Position
4509167..4510582
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AA seq
471 aa
AA seq
DB search
MITSPAFSGKHYAVLGLARSGLATVEALLASGAKVTAWDSKEEARAKLKILPIADGEGDR
AQRGGGVGQDLNTGKPLHRQPAADGPPPHPSGRENLVFADPLTIDLTGYESVIVSPGVPL
NTHPIVGHAAQYGVPVIGDIELFAQAREALPPHEVVGITGTNGKSTTTALITHIIETAGV
PTLMGGNIGLPIMGRDPLEKGGIYVLELSSYQIDLTFSLDCDVAVLTNITPDHLDRYDGF
EGYVASKLRLFSMQDAEHFAVLGEPHIGERWLSPRIPNANLLLALDYSDRQANWPALQGP
HNHQNAACAIATCEALGISEAAIEEGLRTYPGLPHRMQRVAEKKGVLFVNDSKATNATAT
APALGAYPKIHWILGGLPKTDDLDDCAPYFDHVAAAYTIGQAGPMYARILAEAGKKVTES
GTLDQAVKDAAAAARPGEVVMLSPACASFDQFSDYEARGDAFRRAVEGLSL
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaccagtcccgccttctccggcaagcattatgccgtcctcggcctcgcccgctcg
gggctggcgacggtcgaggcgctgctcgcttcgggcgcgaaggtgacggcgtgggacagc
aaggaggaggcgcgggccaagctgaagatcctccccatcgcagatggggagggggaccgc
gcgcagcgcggtggaggggtcgggcaggacctcaacaccggaaaacccctccaccgtcag
cctgcggctgacggtccccctccccacccttcgggcagggagaatctggtttttgccgat
cccctcaccatcgatctcaccggctatgagagcgtgatcgtctcgccgggcgtgccgctc
aacacgcatccgatcgtcggccatgccgcgcaatatggcgtgccagtgatcggcgatatc
gaactgttcgcccaggcccgcgaggccctgccgccgcatgaggtggtgggcatcaccggc
accaacggcaagtcgacgacgaccgcgctgatcacgcacatcatcgagacggccggcgtg
cccaccctgatgggcggcaatatcggcctgccgatcatgggccgcgacccgctcgaaaag
ggcggcatctatgtgctcgaactgtcgagctaccagatcgacctgaccttcagcctcgat
tgcgacgtggcggtgctgaccaacatcacccccgaccatctcgatcgctatgacgggttc
gagggttacgtagcgtcgaagttgcgcctgttctcgatgcaagacgcagaacattttgct
gtgctgggcgaaccccatatcggcgaacgttggctatcgccccggattccgaacgcgaac
ctgttgttggcacttgattacagcgatcgacaggcgaactggccagccttgcaagggccg
cataaccatcagaacgccgcttgcgctatcgcgacatgcgaagccctcggcatttctgag
gctgccatcgaggaaggcctgcgcacctatcccggcctgccgcaccgcatgcagcgcgtt
gccgagaagaagggcgtgctgttcgtcaacgacagcaaggcgaccaacgccaccgccacc
gccccggcgctgggcgcctatccgaagatccactggatcctcggcggcctgcccaagacc
gacgatctcgacgattgcgcgccctatttcgatcatgtcgccgccgcctacacgatcggc
caggccgggccgatgtacgcccgcatcctggccgaggcgggcaagaaggtgaccgagagc
ggcacgctcgaccaggcggtgaaggacgccgccgccgccgcccggccgggcgaggtggtg
atgctgtcgccggcctgtgcgtcgttcgatcagttcagcgattatgaggcacgcggcgac
gccttccgtcgcgcggtggaggggctttcgctatga
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