Rothia dentocariosa: HMPREF0733_10108
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Entry
HMPREF0733_10108 CDS
T01343
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn00860
Porphyrin metabolism
rdn01100
Metabolic pathways
rdn01110
Biosynthesis of secondary metabolites
rdn01120
Microbial metabolism in diverse environments
rdn01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
HMPREF0733_10108 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rdn04147
]
HMPREF0733_10108 (hemB)
Enzymes [BR:
rdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
HMPREF0733_10108 (hemB)
Exosome [BR:
rdn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
HMPREF0733_10108 (hemB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Med12-LCEWAV
Motif
Other DBs
NCBI-ProteinID:
ADP39566
UniProt:
E3H4U7
LinkDB
All DBs
Position
complement(129603..130598)
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AA seq
331 aa
AA seq
DB search
MNLTRRPRRLRITAAMRALTAETALRPEQLIQVFFVRDGISEPQPISSMPGQYQHTLDSL
IPAVRQAVEAGIKCIDLFGVPLDDDKDEIGSAAWDDNGILNRAIAACRADFGDEIVIMAD
TCLDEFTSHGHCGVLVDDGYGTMIVDNDATVELYCKMAVSQARAGAHTVSPSGMMDGQIA
AMRAALDEAGFQNVSIMAYSAKYASAFFGPFRDAVESSFTGNRKTYQQDPANRRESLLEV
QTDIDEGADMVMVKPAGSYLDIVREVAEFSPVPVAAYQVSGEYAMIEAAAANGWIDRRAV
ALEALRSIHRAGADMILTYYAAEAARWLRED
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttacccgacgaccccgccgactgcgcatcaccgccgcgatgcgcgccctcacc
gccgagactgcgctgcgtcccgagcagcttattcaggtgtttttcgtgcgcgacggcatt
agcgaaccacagccgatttcatccatgcccggccagtatcagcacacgctagactctctg
attcctgccgtgcgccaggctgtggaggcgggcattaaatgcatcgacctcttcggcgtt
ccgctggatgatgataaggacgaaataggctcggcggcctgggacgacaacggcattttg
aaccgcgctattgctgcctgccgggcagattttggcgatgagattgttattatggccgat
acttgcctggacgagttcacctctcacgggcactgcggggtgcttgtcgatgatggttac
ggcaccatgattgtcgataacgatgcaaccgtggaactgtactgcaagatggcagtgtct
caggcacgcgccggggcgcatacggtatcgccttcgggcatgatggacggacagattgcc
gcaatgcgcgccgcgctggacgaggccgggttccagaatgtttctatcatggcgtattcg
gcgaagtatgcctccgcgttctttggcccgttccgcgatgcggtggagtctagctttacc
gggaaccgcaaaacgtatcagcaggatccggcgaaccgccgcgaatctctcctagaggtg
cagaccgatattgatgagggcgccgatatggtgatggttaagcccgccggaagctatctc
gatattgtgcgtgaggtcgccgagttttcacctgtcccggtggcggcgtaccaggtgtcg
ggggagtacgccatgattgaggccgccgcagcaaacggctggatcgaccgtcgcgccgtg
gcgttggaggcgctgcgttcgattcaccgcgcgggtgcagacatgattctcacctactat
gcagccgaagctgcccgctggctgcgtgaagactaa
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