Rothia dentocariosa: HMPREF0733_10467
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Entry
HMPREF0733_10467 CDS
T01343
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
rdn
Rothia dentocariosa
Pathway
rdn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HMPREF0733_10467 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rdn03400
]
HMPREF0733_10467 (nth)
Enzymes [BR:
rdn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HMPREF0733_10467 (nth)
DNA repair and recombination proteins [BR:
rdn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HMPREF0733_10467 (nth)
Prokaryotic type
HMPREF0733_10467 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
ADP39925
UniProt:
E3H0J7
LinkDB
All DBs
Position
complement(509980..510906)
Genome browser
AA seq
308 aa
AA seq
DB search
MSASAPKSTTDTAPELQLTEEERELLSIRTVPEFEAAQAARRRAKALAKAPESHLATVRR
ARKINRILGETYPYAVAELDFTNAFELLIATVLSAQTTDVRVNQVTPALFARYPDAPALA
AATEEEVEPYIQSLGFYRAKAKSIVKLARQLTDDYDGEVPGTLDKLVKLAGVGRKTANVV
LGNAFGVPGLTVDTHFGRLARRMGFTTEDDPVKVEHDVAELIEPREWTDFSHRMVYHGRR
ICHARKPASGVCPIADLCPSWGEGETDETKARKLMKYEMAPGRERLHLRFLTGATRRQLH
AEGYPLSA
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcatccgcaccgaaaagcaccaccgacacagccccagagctacagctcaccgaa
gaagaacgtgaactgctaagcatccgcaccgtgcccgagtttgaggcggcacaagcggca
cgccgccgcgcgaaagcactcgccaaagcccccgaaagccaccttgccaccgtgcgccga
gcccgcaaaatcaaccgcatcctgggcgaaacttacccctacgccgtggctgaactcgac
ttcacgaacgcctttgaactgctgatcgccacggtgctctcggcgcaaaccaccgatgtg
cgcgtcaatcaggtaaccccggcgctcttcgcccgctacccggatgcgcccgccctcgcc
gccgccaccgaagaagaagtcgaaccctatattcaatccctcgggttctaccgcgccaaa
gcgaaatctatcgtcaaactcgcccgccagctcaccgacgactacgacggagaagtgccc
ggaacactcgataaactggtgaaactggcaggagtcgggcgcaaaaccgcaaacgtggta
ctcggtaacgctttcggggtacccgggctgaccgtcgatacccatttcggcaggctcgcg
cggcgcatgggattcaccaccgaagacgatcccgtcaaagtcgaacacgacgttgccgag
cttatcgaaccgcgcgaatggaccgacttctcacaccgcatggtctaccacgggcggcgt
atctgccacgcccgcaaacccgccagcggagtctgccccatcgccgacctgtgcccatcc
tggggtgaaggcgagacggacgaaaccaaagcgcgtaaactcatgaaatatgaaatggca
cccggtcgtgaacgcctgcacctgcgcttcctcaccggtgccacacgccgccaactgcac
gccgaaggatacccgctgagtgcctaa
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