Rothia dentocariosa: HMPREF0733_11798
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Entry
HMPREF0733_11798 CDS
T01343
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rdn
Rothia dentocariosa
Brite
KEGG Orthology (KO) [BR:
rdn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rdn03019
]
HMPREF0733_11798 (orn)
03009 Ribosome biogenesis [BR:
rdn03009
]
HMPREF0733_11798 (orn)
Messenger RNA biogenesis [BR:
rdn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HMPREF0733_11798 (orn)
Ribosome biogenesis [BR:
rdn03009
]
Eukaryotic type
Pre-60S particles
RNases
HMPREF0733_11798 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
ADP41255
UniProt:
E3H1N2
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All DBs
Position
1994108..1994701
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AA seq
197 aa
AA seq
DB search
MTGLDLTQDALIEIGVLVTDSDLNILGEGVELVIKPGSEAPAGALENMNSYVRKMHESSG
LLEDLEHGVSMHEAQEAVLKYVKKYVPVAGKAQLGGNSVGMDKRFLERDMPDLMKHLHYR
VIDVSTIKELAARWYPAARHNAPVKTGNHRALGDIKDSIDELKYYRHAIFVPDAPDAITA
ARIARDVETERQTLEEA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcttgatcttacacaggatgcactgattgaaataggcgttcttgtgacggat
tccgatcttaatattttgggtgaaggcgtagagctcgtgatcaaacccggttctgaggca
cccgctggagctcttgagaacatgaatagctatgtgcgaaagatgcatgagtcttcgggg
ctgctagaagaccttgaacatggcgtatctatgcatgaagcgcaggaagcagttcttaaa
tacgtcaagaagtatgttcccgtagcgggcaaagcgcagttgggcggaaattcagtcggc
atggataaacgctttttggagcgcgatatgccagatcttatgaagcatttgcactaccgc
gtaattgatgtatcgacgatcaaagagctcgctgcgcgctggtacccggctgctcgtcat
aatgcgccagttaagaccggaaaccatcgtgctcttggagatatcaaagactcgattgat
gaactcaaatactaccgtcacgcaatttttgttccagatgcaccggatgcgattaccgca
gctcgtatagctcgcgacgtggaaacagaacgtcagactcttgaagaggcgtaa
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