Roseateles depolymerans: RD2015_3521
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Entry
RD2015_3521 CDS
T04166
Name
(GenBank) flagellar biosynthesis sigma factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
rdp
Roseateles depolymerans
Pathway
rdp02020
Two-component system
rdp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RD2015_3521
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RD2015_3521
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rdp03021
]
RD2015_3521
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
rdp02035
]
RD2015_3521
Transcription machinery [BR:
rdp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RD2015_3521
Bacterial motility proteins [BR:
rdp02035
]
Flagellar system
Flagellar assembly proteins
Stator
RD2015_3521
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
UPF0122
GerE
HNH_repeat
HTH_23
Drf_FH3
Ferritin
Phage_antitermQ
Motif
Other DBs
NCBI-ProteinID:
ALV07978
UniProt:
A0A0U3MUE3
LinkDB
All DBs
Position
complement(4105030..4105743)
Genome browser
AA seq
237 aa
AA seq
DB search
MQHAYAEWGAVASAGLSAEIEQRALREYAPLVKRVVRQLSAQASAVMDREDMEQIGLMGL
LEALRRYGPPDAGFGSFAALRVRGAILDELRRQDWRPRTVRQDSHKQRDALRALTRTLGR
EPTEAEILQHLKLSPQAYQEFLQAEVAEELASFDELVEDLAQLPSEQRSPEAQLMVTRSI
AQALSALNEREQKVIQLYYEFDASLKEIAAVLDLTEARVSQINKAALAKMRAHLQRG
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcaacacgcctacgccgaatggggagccgttgcctccgcgggcctgagcgccgagatc
gagcagcgcgcgctgcgcgagtacgcgcccctggtcaagcgagtggtgcgtcaactctcg
gcgcaggccagcgcggtgatggaccgggaagacatggagcagatcggcctgatgggcctg
ctggaagcgctgcgccgctacggcccgccggatgccggattcggcagcttcgcggcgctg
cgggtgcgcggcgccatcctggatgaactgcgccggcaggactggcgtccgcgcaccgtc
cgtcaggacagccacaagcagcgcgatgccctgcgggcgctcacccgcacgctgggccgc
gagccgaccgaggccgagatcctgcagcacctgaagctgagcccgcaggcctaccaggag
ttcctgcaggccgaggtggcggaggagctggccagcttcgacgaactggtggaagacctg
gcccaactgcccagcgagcagcgcagcccggaagcacagctgatggtgacgcgctccatc
gcccaggcgctgtccgcgctgaatgagcgggagcagaaggtcatccagctctattacgaa
ttcgacgccagcctcaaggagatcgccgccgtgctcgatctcaccgaggcccgtgtgtcc
cagatcaacaaggccgcactcgccaagatgcgcgcccatctccagcgaggctga
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