Roseateles depolymerans: RD2015_3559
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Entry
RD2015_3559 CDS
T04166
Name
(GenBank) GTPase RsgA
KO
K06949
ribosome biogenesis GTPase / thiamine phosphate phosphatase [EC:3.6.1.-
3.1.3.100
]
Organism
rdp
Roseateles depolymerans
Pathway
rdp00730
Thiamine metabolism
rdp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rdp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
RD2015_3559
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rdp03009
]
RD2015_3559
Enzymes [BR:
rdp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.100 thiamine phosphate phosphatase
RD2015_3559
Ribosome biogenesis [BR:
rdp03009
]
Prokaryotic type
GTPases
RD2015_3559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RsgA_GTPase
MMR_HSR1
RsgA_N
ABC_tran
AAA_29
AAA_16
nSTAND1
Rad17
AAA_25
nSTAND3
P-loop_TraG
AAA_22
AAA
RNA_helicase
Septin
SRPRB
AAA_23
AAA_7
AAA_30
DUF5906
AAA_18
AAA_28
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ALV08015
UniProt:
A0A0U3LIU1
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All DBs
Position
4148394..4149296
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AA seq
300 aa
AA seq
DB search
MKPAQIGLVVRGHGRHYVVEDENGERVHCLTRGKKSDCVVGDRVRWQRSSDHEGVIDKLE
PRRNLLFRQDEWKTKSFAANLDRLLVLVAAEPQFSESQLTRALIAADSAGITTDILLNKT
DLPQAEAARQRLAPYKAMGQRVLELSLKGRPDEARETLMPLLENQATLVLGPSGTGKSTL
INLLVPDAGAQVGEISQALNSGRHTTTTTQWYWLDDRRETALLDSPGFQEFGLRQIPAPE
LASHMADFKPFLGECRFHNCSHRHEPGCAVLTAVEAGKISPSRYRIYDELWQELSSPPRY
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggcgcagatcgggctggtggtgcgcggccacggccgtcactacgtggtggaa
gacgagaacggcgaacgggtgcattgcctgacccgcggcaagaaaagcgactgcgtggtg
ggcgaccgggtgcgctggcagcgcagcagcgaccatgaaggcgtcatcgacaagctcgaa
ccgcggcgcaacctgctgttccgacaggacgagtggaagaccaagagcttcgcggccaac
ctggaccggttgctggtgctggtggccgccgagccacagttttccgaatcgcagctgacc
cgcgcgctgattgccgcggacagcgccggcatcaccaccgacatcctgctgaacaagacc
gacctgccgcaggccgaagcggcccgccagcgcctggcgccctacaaggcgatgggccag
cgggtgctggagctgagcctcaagggtcggccggacgaagcacgtgagacgctgatgccc
ctgctggaaaaccaggccacgctggtgctggggcccagcggcaccggcaagagcacgctg
atcaacctgctggtgcccgatgcaggcgcgcaggtgggcgagatttcccaggcgctcaac
tccggacgccacaccacgaccaccacgcagtggtattggctggacgaccgccgcgagacc
gcgctgctggattcaccgggcttccaggaattcgggttgcggcagattcccgcgccggag
ctggccagtcacatggccgatttcaagcccttcctcggtgaatgccgcttccacaactgc
agtcaccggcatgagccgggctgcgccgtgctgacggccgtggaggcagggaagatcagc
ccgtcgcgctaccgcatctatgacgagctctggcaggagctgagcagcccgccgcgttat
tga
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