Rhodococcus erythropolis BG43: XU06_18055
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Entry
XU06_18055 CDS
T03842
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
reb
Rhodococcus erythropolis BG43
Pathway
reb00300
Lysine biosynthesis
reb00470
D-Amino acid metabolism
reb01100
Metabolic pathways
reb01110
Biosynthesis of secondary metabolites
reb01120
Microbial metabolism in diverse environments
reb01230
Biosynthesis of amino acids
Module
reb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
reb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
XU06_18055
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
XU06_18055
Enzymes [BR:
reb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
XU06_18055
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AKD98394
LinkDB
All DBs
Position
3951731..3953074
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AA seq
447 aa
AA seq
DB search
MTLLEIFPSLRGAMTPRMDPALWPISTRHDHSGRVCIGDVSLEEIADQYGTPTYVVDEAD
VRHRCRTYREIFPDSEIVYAGKALMIRAMATWVSDEGLGVDVCSAGELAVALAAGVDPHR
IILHGNAKSVSELRAAVNAGVGRIVLDSPSEAVRLASVCTHRQKVLIRVTPGIDIHGHKA
VSTGILDQKFGLPAFSEELERTVSVVANATHLQLIGLHCHLGSQITDPELFRPAIETMIA
QMDDIRRTHRIILTELDLGGGHGIAYMPGDAQLDLTRLAHVIDETLDDACTRNRFPRPEI
VLEPGRAIAARAGVTLYRVQNIKSISGGRTFVSVDGGMSDNPRVSLYDSHYDVELVNRHS
SAPLQEVTVAGRHCESGDEIAVGARLPADLHEGDLLAVPCTGAYHHSMASTYNSVGRPPV
VAVLGGIARPLIRRESINDLLAREVGI
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgacgctactcgaaatcttcccctccctacgcggcgcaatgacaccacgtatggatcct
gcgttgtggcccatcagcactcgccacgaccacagcgggcgtgtctgcatcggcgacgtc
tccctcgaagagatcgcggaccagtacggcacaccgacgtacgtcgtcgacgaggcggac
gtgcggcaccgctgccgcacgtatcgagagatcttccccgactcggagatcgtgtacgcc
ggcaaggcactgatgattcgagcgatggctacctgggtctccgacgagggactcggggtg
gatgtctgttccgccggtgaactcgccgtcgcgcttgccgcgggcgtggacccccaccga
atcatcctgcacggcaatgccaaatcggtttccgaactgagggcggcggtcaacgcgggt
gtcggccggatcgtcctcgactcccccagcgaagcggtacggctcgcgtcggtgtgtacc
caccgacagaaggtgttgatcagagtcacacccggcatcgacatacacggacacaaggca
gtgtccacaggcatcttggaccaaaagttcggcctaccagcgttttccgaagaactggaa
cgtacggtatccgtcgtcgccaacgcgacgcacctgcaactcatcggcctgcattgccat
ctcggctcccagatcaccgatcccgaactcttccgccccgcgatcgagacgatgatcgca
cagatggacgacatacgacgcacgcatcgaatcatcctcaccgaactcgatctcggcggt
ggccatgggatcgcatacatgccgggagacgcccaactggatctgacccgcctcgctcac
gtcatcgacgaaactctcgacgacgcgtgcacccgaaaccgcttccctcgccccgaaatc
gtgctcgagcctggccgagcgatcgccgcgcgcgccggagtcacgctctatcgcgtacag
aacatcaagtcgatcagcggcggtcgaaccttcgtttccgtcgacggtgggatgagcgac
aaccctcgggtgtcgttgtacgacagccactacgacgtcgaattggtgaaccggcattcg
agcgcaccgctccaggaagtcaccgtcgccgggcggcactgcgaatcgggcgacgaaatc
gccgtcggagcaaggcttcccgccgacctacatgaaggtgacctgttggcagtgccgtgt
acgggcgcataccaccacagcatggcctccacttacaacagcgtcggccggccaccggtc
gtcgctgtgctgggcgggattgcgcggccattgatcaggcgtgaatcgatcaacgaccta
ttagcccgcgaggtcggcatctga
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