Roseibacterium elongatum: roselon_03421
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Entry
roselon_03421 CDS
T03060
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
red
Roseibacterium elongatum
Brite
KEGG Orthology (KO) [BR:
red00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
red03021
]
roselon_03421
Transcription machinery [BR:
red03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
roselon_03421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_Tnp_1
HTH_28
DUF1804
DUF4635
Motif
Other DBs
NCBI-ProteinID:
AHM05679
UniProt:
W8RWT7
LinkDB
All DBs
Position
complement(3274641..3275180)
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AA seq
179 aa
AA seq
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MTARAELETLISRVALGDRAAFSALYDATSAKLFGVCLRVLKVRAEAEDVLQEVYVLIWR
KADRYKVTGHSPMTWLITLARNRAIDRLRARKPSTDLDDAGPLPDGTPGPEAQAVAAGEA
RRVVACMEELKADRAQAVRGAYLDGMSYADLAERHAVPLNTMRTWLRRSLQQLKECLSR
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgcgcgcagaactggaaaccctgatttcccgggtggcccttggggaccgcgcg
gcgttttccgccctttacgatgccacctcggcgaaacttttcggggtgtgcctgcgtgtc
ctcaaggtaagggccgaggccgaagacgtcctgcaagaggtgtacgttctgatctggcgc
aaggccgaccgctacaaggtcacgggccacagcccgatgacgtggttgatcacgctggcg
cgcaatcgggcgatcgaccggctgcgggcccgcaaaccgtcgaccgacctcgacgatgca
gggccgctgcccgatggcacgcccggtcccgaggcgcaggccgtcgccgccggcgaggcg
cgccgcgtcgtggcctgcatggaagaattgaaggcagatcgcgcgcaggcggtgcgcggc
gcctatctggatgggatgagttacgccgacctggccgaacgtcacgcggtgccgctgaac
acgatgcgaacctggctgcggcgcagcctgcaacagttgaaggagtgcctgtccagatga
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