Rhizobium etli bv. mimosae IE4771: IE4771_CH01731
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Entry
IE4771_CH01731 CDS
T03310
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rei
Rhizobium etli bv. mimosae IE4771
Pathway
rei03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IE4771_CH01731 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rei03021
]
IE4771_CH01731 (rpoB)
03400 DNA repair and recombination proteins [BR:
rei03400
]
IE4771_CH01731 (rpoB)
Enzymes [BR:
rei01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IE4771_CH01731 (rpoB)
Transcription machinery [BR:
rei03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IE4771_CH01731 (rpoB)
DNA repair and recombination proteins [BR:
rei03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IE4771_CH01731 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
AIC26859
UniProt:
A0A060HZE0
LinkDB
All DBs
Position
1733002..1737141
Genome browser
AA seq
1379 aa
AA seq
DB search
MAQTLSFNGRRRVRKFFGKIPEVAEMPNLIEVQKASYDQFLMVEEPKGGRPDEGLQAVFK
SVFPITDFSGASMLEFVSYEFEPPKFDVDECRQRDLTYAAPLKVTLRLIVFDIDEDTGAK
SIKDIKEQSVYMGDMPLMTNNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILDTFYTKSLYKR
DGEGWRIPFKPETLKGAKAITEMVDADTGEVVVEAGKKLTPRLLRQLSDKGLKALKAGDD
DLYGNYLAEDIVNYSTGEIYLEAGDEIDEKTLGVILANGFDEIPVLGIDHINVGAYIRNT
LSADKNENRQDALFDIYRVMRPGEPPTMESAEAMFNSLFFDAERYDLSAVGRVKMNMRLD
LTVEDTVRILRKDDILAVVKMLVELRDGKGEIDDIDNLGNRRVRSVGELMENQYRLGLLR
MERAIKERMSSIEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQVNPLSEITHKRRL
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRIVDGKVTNDVLYLSAMEEAKYYVAQANAEMNPDGSFVDEFVVCRHAGEVMLAPRDSM
NLMDVSPKQVVSVAAALIPFLENDDANRALMGSNMQRQAVPLLRAEAPFVGTGMEPVVAR
DSGAAIGARRGGVVDQVDATRIVIRATEDLEAGKSGVDIYRLQKFQRSNQNTCVNQRPLV
TVGDVVNRGDILADGPSTDLGDLALGRNALVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSMRMPPGTYGTIVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLIDMLRGQVSIAGPKGFKKGTELSNAVVSEYPRSQWW
MFAVEDEKVQSELEALRGQYDESKSRLEQRFMDKVEKVQRGDEMPPGVMKMVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFLEDGTHVDVVLNPLGVPSRMNVGQILETHLG
WACAGMGRQIGELIEAYKANGNIEPLRKTIGDVVGAGPKAEQVHEFDDESVLRLADQWKR
GVSIATPVFDGANEGDVNDMLRLAGLKDTGQSTLYDGRTGEQFDRQVTVGYIYMLKLNHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYEAIVRGDDTFEAGIPESFNVLVKEMRSLGLSVELENTKLDEAQANQLPDAAE
NT seq
4140 nt
NT seq
+upstream
nt +downstream
nt
atggctcagaccctttcgttcaacggtcgcaggcgcgtacgcaagttttttggtaagatc
cccgaagtcgcagaaatgccgaacctcatcgaggttcagaaggcgtcctacgaccagttt
ctgatggtggaagagccgaagggcggccggcccgacgagggtcttcaggccgtcttcaag
tcggttttcccgatcactgatttctccggcgcctcgatgctggaattcgtatcttacgag
ttcgagccgccgaagttcgacgtcgacgaatgccgccagcgcgacctgacctatgccgcg
ccgctgaaggtgacgctgcgcctcatcgtgttcgatatcgacgaggataccggcgcgaag
tcgatcaaggacatcaaggaacagtccgtctacatgggcgatatgccgctcatgaccaac
aacggcacgttcatcgtcaatggcaccgagcgcgtcatcgtctcccagatgcaccgttcg
ccgggcgtcttcttcgaccatgacaagggcaagagccattcttccggcaagctgctcttt
gctgcccgcgtcattccctatcgcggctcctggctcgatatcgaatttgacgccaaggac
atcgtctacgcccgtatcgaccgccgccgcaagattccggtgacctcgctgctgatggcg
ctcggcatggacggcgaagaaatcctcgacaccttctacacgaagtcgctctacaagcgc
gacggcgaaggctggcgcattcccttcaagccggaaacgctgaagggcgccaaggcgatc
accgagatggtcgacgccgataccggcgaagtcgtcgtcgaagccggcaagaagctgacc
ccgcgcctgttgcgccagctgtcggacaagggcctgaaggcgctgaaggccggcgacgac
gacctctacggcaattacctcgccgaggacatcgtcaactactccaccggtgaaatctat
ctcgaagccggcgatgagatcgatgagaagacgctcggcgtcatcctggcgaatggtttc
gacgagatcccggttctcggcatcgaccacatcaatgtcggcgcctatatccgcaacacg
ctgtcggccgacaagaacgagaaccgtcaggacgctctgttcgacatctaccgcgtcatg
cgtccgggtgaaccgccgaccatggaatcggccgaagccatgttcaactcgctgttcttc
gatgcggagcgttacgacctctccgccgtcggccgcgtcaagatgaatatgcgtctcgac
ctgaccgtcgaagacaccgtccgcatcctgcgcaaggacgacatcctggccgtggtcaag
atgctggtcgaactgcgcgacggcaagggcgagatcgacgacatcgacaacctcggcaac
cgccgcgtccgctcggtcggcgagctgatggagaaccagtaccgtctcggcctgctgcgc
atggagcgcgcgatcaaggaacgcatgtcctcgatcgagatcgatacggtcatgccgcag
gatctgatcaacgccaagccggccgccgcagctgtgcgcgaattcttcggttcctcgcag
ctctcgcagttcatggaccaggtcaatccgctctcggaaatcacccacaagcgccgtctt
tcggctcttggcccgggtggtctgacccgcgagcgcgccggcttcgaagtccgcgacgtg
catccgacccactacggccgcatctgcccgatcgaaacgccggaaggcccgaacatcggt
ctgatcaactcgcttgcaacctttgcccgcgtcaacaagtacggcttcatcgaaagcccg
taccgccgcatcgtcgacggcaaggtgacgaatgacgtgctctacctctccgccatggaa
gaggccaagtactatgtcgcccaggccaacgccgaaatgaacccggacggctccttcgtc
gacgaattcgtcgtctgccgtcacgccggcgaagttatgctcgccccgcgcgacagcatg
aacctgatggacgtttcgccgaagcaggtcgtttcggttgctgcggcactcatcccgttc
ctggaaaacgacgacgccaaccgcgctctcatgggctcgaacatgcagcgtcaggccgtg
ccgctgctgcgtgccgaagccccgttcgtcggcaccggcatggagccggtcgtcgcccgt
gactccggcgcggccatcggcgcgcgccgcggcggcgtggtcgaccaggtcgacgcgacg
cgtatcgttatccgcgccacggaagacctcgaagccggcaagtccggcgtcgatatctac
cgcctgcagaagttccagcgttcgaaccagaacacctgcgtcaaccagcgtccgctggtc
accgtcggtgacgtcgtcaaccgcggcgacattctcgccgacggtccctcgaccgatctc
ggcgacctggcgctcggccgcaacgcgctcgtcgcgttcatgccctggaacggctacaac
tacgaagactcgatcctgctctccgagcgcatcgttgccgacgacgtgttcacctccatc
cacatcgaggaattcgaagtgatggcgcgcgacaccaagctcggccctgaggaaatcacc
cgcgacattccgaacgtttcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tatatcggcgccgaagttcagccgggcgatatcctcgtcggcaagatcacgccgaagggc
gaaagcccgatgacgccggaagaaaagctgctgcgcgccatcttcggcgaaaaggcctcc
gacgtgcgcgacacctccatgcgcatgccgcccggcacctacggcacgatcgtcgaagtt
cgcgtcttcaaccgccatggcgtcgagaaggacgagcgcgcgatggcgatcgagcgcgaa
gagatcgagcgtcttgccaaggaccgcgacgacgagcaggcgatcctcgatcgtaacgtc
tacggccgtctgatcgacatgctgcgcggccaggtctcgattgccggcccgaagggcttc
aagaagggcaccgagctttcgaacgccgtcgtctccgaatatccccgctcgcagtggtgg
atgttcgccgtcgaggacgagaaggtccagagcgagctcgaagcactccgcggccagtac
gacgaatccaagtcgcgccttgagcagcgcttcatggacaaggtcgagaaggtccagcgc
ggcgatgaaatgcctccgggtgtcatgaagatggtcaaggtcttcgtcgccgtgaagcgc
aagatccagccgggggacaagatggccggccgtcacgggaacaagggcgtggtttcgcgc
attgtgcctgtcgaggatatgccgttccttgaagacggcacgcatgtcgacgtcgttctg
aacccgctcggcgttccctctcgcatgaacgtcggccagatcctggaaacgcacctgggc
tgggcttgcgccggcatgggtcgccagatcggcgaattgatcgaagcctacaaggcgaac
ggcaacatcgagccgctgcgcaagaccatcggcgatgtcgtcggtgccggcccgaaggcc
gagcaggtccacgaattcgacgatgagtcggttctgcgtctcgccgatcagtggaagcgc
ggcgtttcgattgcaacgcctgtcttcgacggtgccaacgaaggcgacgtcaacgacatg
ctgcgtctggcgggtctcaaggacaccggccagtcgacgctctatgacggccgtaccggc
gagcagttcgaccgccaggtcacggtgggctacatctacatgctgaagctcaaccacctg
gtcgacgataagatccatgcccgctcgatcggtccttactcgctcgtcacccagcagccg
ttgggcggcaaggcgcagttcggcggtcagcgcttcggcgaaatggaagtctgggcgctc
gaagcttacggcgcggcctacacgctgcaggaaatgctgacggtgaagtcggacgacgtc
gccggccgcaccaaggtctacgaagccatcgtccgcggagacgacacgttcgaagccggt
attccggaaagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctcagcgtcgag
cttgagaacactaagcttgatgaggcgcaggcaaaccagctgcccgacgcggccgagtaa
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integrated database retrieval system
