Rhizobium etli bv. mimosae IE4771: IE4771_PC00112
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Entry
IE4771_PC00112 CDS
T03310
Name
(GenBank) YcaO-like protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
rei
Rhizobium etli bv. mimosae IE4771
Brite
KEGG Orthology (KO) [BR:
rei00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rei03009
]
IE4771_PC00112
Ribosome biogenesis [BR:
rei03009
]
Prokaryotic type
ribosomal protein modification factors
IE4771_PC00112
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO
Motif
Other DBs
NCBI-ProteinID:
AIC30238
UniProt:
A0A060I587
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All DBs
Position
pRetIE4771c:complement(136207..137352)
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AA seq
381 aa
AA seq
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MLDNIAHILADTEPPSPPDPWQTVQHILALRAEYGITRLGSITGLDRIGVPVVQVVRPRS
RSVAVSQGKGLTFPLAAISGLMESLEGWASERIEPERTFMASLRDINARGDWSHLGIGRD
EEILSWIDGLDLLSGRQMAVPLALVDTAYLVPSPHPHWIARDTTGLAAGTSLQGAVLHAC
LEILERQARCTAMKTPHFFDRFQIDSRSVQSGSAGDIMQRLAQTGFVVGIWQIPAPHALP
VYWCHVMEDASQAPFAPLPAEGFGCDFSHDRALTSALLEACQSRLGVISAARDDIRTELY
GHADVSELAAWREQLAKGGRSYAPGSGAGDRSLRPVIEALKLAGAHAAALVVLHSDDRVP
LHVVRVVAPPLETNPEADLAR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgctcgataacatcgctcatatcctcgctgataccgagcccccctcgcctcccgatccc
tggcagacggtgcagcatatcctcgcgctcagagcggaatacggcatcacccggctcggt
tcgatcaccgggctcgaccggatcggcgttccggtcgttcaggtcgtgcggccgcgctca
cgctccgtcgccgtcagccagggcaaggggctgacctttcccctggcggcgatctcgggc
ctgatggaatcgctggaaggctgggcctcggagcggattgagccggagcgtaccttcatg
gcaagcctgcgcgacatcaacgcccggggagactggtcgcatctcggcatcggccgcgac
gaggagattctctcctggattgacgggctcgatctcctttcggggcggcaaatggcggtt
ccgcttgccctcgtcgatactgcctatctcgtcccgtcgccgcatccccattggatcgcc
cgcgacacgacgggcctcgccgccggcacgagcctgcaaggcgccgtcctgcatgcctgc
ctggaaattctggaacggcaggcgcggtgcacggcgatgaagactccgcatttcttcgac
cgcttccagatcgacagccggtcggtgcaatcgggaagcgccggcgacatcatgcagcgg
ctcgcccaaacaggttttgtcgtcggaatctggcagatcccggcgccgcacgcgttgccg
gtatattggtgtcacgtcatggaagatgcgagccaggccccctttgcgcctttgccggcg
gaaggcttcggctgcgatttcagccacgacagggcgctgaccagcgccttgctcgaagcc
tgccagtcccgcctcggcgtcatttcagcggcgcgcgacgatatcaggacggagctttac
ggccatgccgacgtgagcgaactggccgcgtggcgcgaacaactcgcaaaaggcggccgc
tcctatgcccccggttccggcgccggcgaccggtccctacggccggtcatcgaggcgctg
aagctggcgggcgcgcatgcggccgctcttgtcgttcttcattccgatgatcgcgtccca
cttcacgtcgtacgcgtcgttgcgccgccgctggaaaccaatccggaggccgatcttgcg
cgatga
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