Rhizobium etli bv. mimosae Mim1: REMIM1_CH00139
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Entry
REMIM1_CH00139 CDS
T02778
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
rel
Rhizobium etli bv. mimosae Mim1
Pathway
rel00540
Lipopolysaccharide biosynthesis
rel01100
Metabolic pathways
rel01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
REMIM1_CH00139 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rel01005
]
REMIM1_CH00139 (kdsB)
Enzymes [BR:
rel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
REMIM1_CH00139 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
rel01005
]
Lipid A
REMIM1_CH00139 (kdsB)
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Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF2064
SIP
Motif
Other DBs
NCBI-ProteinID:
AGS20013
UniProt:
S5RQI5
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Position
complement(142189..142944)
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AA seq
251 aa
AA seq
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MGDSNFDDVLVLIPARMASTRLPGKPLADICGLPMIVQVAMRAKEAEIGRVVVAVDDPQV
FDTVAAAGFEVVMTSKDHQSGSDRIFEALKKIDPDGKAKFIVNVQGDLPTIEPETVRAAL
RPLENEAVDIGTLTIEIDNEEDKTAPHIVKVIGSPISDTRLRGLYFTRATAPYGKGPLYH
HIGLYAYRRAALERFVSLGPSTLERRESLEQLRALEAGMRIDAEIVDTVPLGVDTPADLE
KARRILSARQN
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattcaaatttcgacgacgtgcttgtattgatcccggcacggatggcctccact
cggcttccgggcaagccgctcgccgacatttgcggactgccgatgatcgtgcaggtggcg
atgcgcgcaaaagaagccgaaatcggccgggtcgtcgtcgccgtcgacgacccgcaggtg
ttcgacacggtggccgccgccggcttcgaagtcgtcatgaccagcaaggatcatcaatcc
ggctccgaccgcatcttcgaggcgctgaagaagatcgatccggacggcaaggcaaagttc
atcgtcaacgtccagggcgacctgccgacgatcgagccggaaacggtgcgggcggccttg
cgccccctcgagaacgaagcggtcgatatcggcacgctgaccatcgaaatcgataatgag
gaggacaagaccgcgccgcacatcgtcaaggtcatcggctcgccgatttccgacacccgc
ctgcgcggcctctacttcactcgtgcgacggcgccatacggcaaggggccgctttaccat
catatcggcctctatgcctaccggcgcgctgcgctcgaacggttcgtctcactcggcccg
tcgacgcttgaaaggcgagaatcgctggagcagctgcgggcactggaggctggcatgcgc
atcgatgccgagatcgttgacacggttccgctcggtgtcgatactccggccgacctcgaa
aaagcgcggcgaatcctctctgcacggcagaattga
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