Rhizobium etli bv. mimosae Mim1: REMIM1_PB00153
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Entry
REMIM1_PB00153 CDS
T02778
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rel
Rhizobium etli bv. mimosae Mim1
Brite
KEGG Orthology (KO) [BR:
rel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rel03021
]
REMIM1_PB00153
Transcription machinery [BR:
rel03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
REMIM1_PB00153
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
GerE
DUF134
HTH_29
HTH_1
Prok-TraM
Motif
Other DBs
NCBI-ProteinID:
AGS24273
UniProt:
S5S259
LinkDB
All DBs
Position
pRetMIM1b:163996..164517
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AA seq
173 aa
AA seq
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MDAELIERAQRGDREAFGQLVSRHYDFVRATAWRWSGSSTDADDIAQEVCVKIGAAMRSF
RGASHFRTWLYTLTLNAARDHRRKRAREQQTFRAYAAEPRQDAPGGEDEISNALWAAVRA
LPERQCDAVLLVYGEGLSHSAAAAVMGCSEATVSWQVHEARKRLKAMFGKEEV
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
ttggatgcggagctcatagaacgagcacagcgcggcgaccgggaagccttcgggcaactg
gtctcgcgccattatgatttcgtccgcgcgacggcgtggcggtggtcgggcagttccacg
gatgcggacgatatcgcccaggaggtctgcgtcaaaatcggtgccgccatgcgcagcttt
cgcggcgccagccacttcaggacatggctttacacgctgacgctgaacgccgctcgcgat
cacagacgcaaacgcgcacgagagcagcagacgttccgcgcctatgctgctgaaccccgg
caggatgcgccgggcggagaagacgagatatcgaacgcattgtgggcggccgtgcgcgct
ttgccggaacggcaatgcgacgccgtgctgctcgtctatggcgaaggcctcagccattcg
gccgccgccgctgtcatgggctgctcggaggcgaccgtctcctggcaggtccacgaggcg
cgcaagcggctgaaggccatgttcggcaaggaagaggtatga
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