Candidatus Ruthia endofausta: HUE58_00125
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Entry
HUE58_00125 CDS
T06701
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
reo
Candidatus Ruthia endofausta
Pathway
reo00550
Peptidoglycan biosynthesis
reo01100
Metabolic pathways
reo01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
reo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUE58_00125 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUE58_00125 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
reo01011
]
HUE58_00125 (mrdA)
Enzymes [BR:
reo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HUE58_00125 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
reo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HUE58_00125 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
LBP_M
Motif
Other DBs
NCBI-ProteinID:
QKQ23646
UniProt:
A0A6N0HMS4
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All DBs
Position
complement(27173..29020)
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AA seq
615 aa
AA seq
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MQSINNAQLENKILFSRLRLALIFIFLLTTLLVIRIYNLQIVNHEYYLEEALGNQMRTLP
ITPSRGKIFDRYDNVLATNKLAFRLTLTQEKTKNIAKTLQQLKQSGFINDNNIKSFNKNA
RRYQKFHSIPIKYNLNETQVAKFLISNAFIGVDIEPYFHRIYPNQGSSVHVVGYVSRITK
KEKLFYDKKNYLGALFVGKTGIEKQYETRLHGTNGLQQIERNVSGRVIDTQVIKPAIAGE
NLYLSIDLDMQKKAETLLQGKRGSIVVIDVRNGEILTLVSTPIYNPNWFVNGISHANYNQ
LQTSTNIPQLNRAVQGLYPPGSTIKPMVALAGLEENIISNKSSTFCSGYYKLPNVKRKFN
DWKKTGHGYVNVKDSIAQSCDVFFYDLADKLGIDKLHDNLDLFNFGRKTGIDIPGESAGI
LPSKTWKNKNKNEPWYRGETLITGIGQGFIAVTPLQLAVATAAIANKGSLFRPTLLKNTQ
VPGNIIIESKKGRHIQIPIKNIQNWENVIDGMKQTIYGPKGTARRLNKGLTYTLAGKTGT
AQVFGLDAEEQYIAEKLDEKLRDHALFTGFAPIENPEIAIAIIVENTGNGSSKAAPIARQ
VLDVYFDKQLNNTSP
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtataaataatgctcaacttgaaaacaaaatactcttctctaggttgaggtta
gcacttatttttatatttttactaaccactttattagtgattagaatctacaatttacaa
atagtaaaccatgaatattacttagaagaagctttgggtaaccaaatgcgtactctaccc
ataacacctagtagaggaaaaatatttgatcgctatgataatgttttagctactaacaag
ttggcatttcgattgaccttaacacaagaaaaaactaaaaatattgctaaaacactacaa
caactcaaacaatctggctttatcaacgataataacatcaaaagctttaataaaaatgca
aggcgttatcaaaaatttcatagcatcccaatcaaatataatcttaatgaaactcaggtt
gcaaaattcttaattagtaatgcttttattggtgtagatatagagccttattttcatcgg
atttatcccaatcaaggttctagcgttcatgtcgttggttatgtttctagaataactaag
aaagagaagcttttttacgataagaaaaactatttaggagccttgtttgtaggtaaaact
ggcattgaaaaacaatacgaaacacgattgcatggcactaatggcttgcaacaaattgag
cgaaatgtaagtggcagagttattgacacccaagttattaaacctgctattgcaggtgag
aatttatatttaagcattgacttagatatgcaaaaaaaagcagaaacattacttcaaggc
aaacgtggttcaattgtagttatagatgtcaggaatggggaaatattaacgctagttagt
acgcccatctataatccaaactggtttgttaatggcatatcacatgctaactataaccag
ttgcaaacttcaacaaatatccctcagcttaaccgcgccgttcaagggctatacccacca
gggtctacaattaaacccatggtggctctagcaggtttggaagaaaatattattagtaat
aaaagtagcaccttctgctcaggttattacaaattacccaacgttaaacgcaaatttaac
gactggaaaaaaacaggacatggatacgtaaatgtcaaagactcaatcgcacaatcgtgt
gatgtgtttttctatgatttggcagataaattgggtattgacaaattacacgataattta
gacttatttaattttggccgaaaaacaggcattgatattcccggagaaagcgctggtatt
ctaccctctaaaacttggaaaaataaaaataaaaatgagccttggtatcgcggagagacc
ttaattacaggcattggtcaaggatttatagctgttactcctttgcagcttgcagttgcc
acagcagcgattgccaacaaggggtctttatttcggccaaccttacttaaaaatacgcaa
gtacctggcaatataatcattgaatctaaaaaaggtcgccatatacaaattccaattaaa
aatattcaaaattgggaaaatgtgattgacggaatgaaacaaaccatttacggccctaaa
ggcaccgctagaagactcaataagggtttaacttataccttagctggaaaaactggaact
gcacaagtgttcggccttgacgctgaagagcaatatattgcagaaaaacttgatgaaaaa
ttacgagatcatgctttgtttactggctttgcccctattgaaaatccagagatagccatc
gctattattgttgaaaatacaggcaatggcagctcaaaagcagcaccaattgcacgtcaa
gtgcttgatgtatattttgacaagcaactaaacaatacttcgccttaa
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