Rhizobium etli bv. phaseoli IE4803: IE4803_CH01714
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Entry
IE4803_CH01714 CDS
T03667
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
rep
Rhizobium etli bv. phaseoli IE4803
Pathway
rep03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IE4803_CH01714 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rep03021
]
IE4803_CH01714 (rpoA)
03400 DNA repair and recombination proteins [BR:
rep03400
]
IE4803_CH01714 (rpoA)
Enzymes [BR:
rep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IE4803_CH01714 (rpoA)
Transcription machinery [BR:
rep03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IE4803_CH01714 (rpoA)
DNA repair and recombination proteins [BR:
rep03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IE4803_CH01714 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AJC78929
LinkDB
All DBs
Position
1715051..1716061
Genome browser
AA seq
336 aa
AA seq
DB search
MIQKNWQELIKPNKVEFSSSSRTRATLVAEPLERGFGLTLGNALRRVLLSSLRGAAVTAV
QIDGVLHEFSSIPGVREDVTDIVLNIKEIAIKMDGDDAKRMVVRKQGPGVVTAGDIQTVG
DIEILNPEHVICTLDEGAEIRMEFTVNNGKGYVPAERNRAEDAPIGLIPVDSLYSPVKKV
SYKVENTREGQVLDYDKLNMTIETDGSITGEDAVAFAARILQDQLGVFVNFDEPQKETEE
EAVTELAFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKSLN
EIKEVLASMGLHLGMEVPAWPPENIEDLAKRYEDQY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgattcagaagaactggcaggaactgatcaagccgaacaaggtggagttctcctcgagc
tcgcgcaccagggcgacgctcgttgccgaaccgctggagcgcggcttcggtctcaccctc
ggcaacgcgctgcgtcgcgttctgctctcctcgctgcgcggtgccgccgtcacggcggtg
cagatcgacggcgtgctgcatgaattctcctcgattccgggcgttcgcgaagacgtcacc
gacatcgtgctcaacatcaaggaaatcgccatcaagatggatggcgacgacgcaaagcgc
atggtcgtgcgcaagcagggcccgggcgttgttacggctggcgacatccagacggtcggc
gatatcgaaatcctcaaccccgagcatgtgatctgcacgctcgacgagggcgccgaaatc
cgcatggaattcaccgtcaacaacggcaagggctacgttccggccgaacgcaatcgtgcg
gaagatgctccgatcggtctcatcccggtcgacagcctttattcgccggtcaagaaggtg
tcctacaaggttgaaaatacccgcgaaggacaggttctcgactacgacaagctgaacatg
accattgaaaccgatggctcgatcaccggcgaagacgccgtcgcttttgcggcgcgcatc
cttcaggatcagcttggcgtcttcgtcaactttgacgagccgcagaaggaaaccgaagag
gaagcagtcaccgaactcgctttcaacccggctctcctcaagaaggtggacgaactcgag
ctgtcggtccgttcggcaaactgcctgaagaacgacaacatcgtctacatcggcgacctc
attcagaagaccgaagcagaaatgctccgcacaccgaattttggtcgcaagtcgctgaac
gaaatcaaggaagttctcgcttccatgggcctgcacctcggcatggaagtgccggcatgg
ccgcccgagaacatcgaagatctcgccaagcgttacgaagaccaatactga
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