Rhodococcus erythropolis PR4: RER_52790
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Entry
RER_52790 CDS
T00881
Name
(GenBank) putative hydrolase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer00300
Lysine biosynthesis
rer01100
Metabolic pathways
rer01120
Microbial metabolism in diverse environments
rer01230
Biosynthesis of amino acids
Module
rer_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RER_52790
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rer01002
]
RER_52790
Enzymes [BR:
rer01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
RER_52790
Peptidases and inhibitors [BR:
rer01002
]
Metallo peptidases
Family M20
RER_52790
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
BAH35987
NITE:
RER_52790
UniProt:
C0ZRZ5
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All DBs
Position
complement(5740776..5741858)
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AA seq
360 aa
AA seq
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MDSLGLLSELVALDTVSGEAAPQRRAMDSIVSLVLSRAPQAKVESDLTGNHPWALITNEA
APSAARLLFACHVDTVPVGTVSDWEFDPYAAQVDGELFLGRGTSDMKAGLVAATAAVVDA
FERGVPVALLLTSDEEIGSLGAVRSADAVANLEVGAVIVPEATGNRINLGHRGALWLEVS
VKGKAAHGSTPQRGTNAVLKLLDVVDRARRELPLSSDAFLGAETWNLGLVGGGSAPNIVP
DNARAVIDHRTVGDGADLLAWWRAQPEVDSVETSIHLGGVRTDASDPWLATLPIPVATEP
VSYFTDASVLAAAAPGAPVVIWGPGTPSLMHAANESVKVSELNDAIAAYGAVAAAWPTVD
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atggattccctcggacttctctcggaactggtagctctcgacacggtctcgggggaggcc
gctcctcaacggcgggcgatggattcgattgtctcgttggttctctcacgtgcgccacag
gcgaaggtggagtcagacctgaccggcaatcatccctgggccttgatcaccaacgaagct
gcaccctcggcagccagactcctgttcgcctgccacgtggacacggtgccagtgggcact
gtctccgactgggagttcgacccgtacgccgcacaggtcgacggcgaattgttcctcggc
agagggacatcggatatgaaggccggccttgttgccgctactgccgcggttgtcgacgct
ttcgaacgtggagtcccggtcgcactactgctgacgagcgacgaggaaatcggatcgctc
ggggccgttcgttcggccgacgccgtggcgaatctcgaggtcggggctgtcatcgttccc
gaggcgaccggcaatcgcatcaacctggggcaccgcggtgcactgtggctcgaagtgtcc
gtcaaaggaaaagccgcgcacgggagtacgccgcagcgaggaactaacgctgtcctcaaa
ctgcttgacgtcgtcgatcgagctcggcgtgagcttccgctgtcgtccgacgcgtttctg
ggcgccgaaacctggaacctcggtttggtcggcggcggttcggctccgaacatcgtgccg
gacaatgcacgtgcggtgatcgatcaccgcacggtgggagacggcgcagacctgcttgca
tggtggcgcgcccaaccggaagtcgactcggtggagacgtcgattcacctgggaggtgtg
cgtaccgacgcgtcggatccgtggttggctaccttgccgatccctgttgcaaccgaaccg
gtttcgtacttcaccgacgcttcggtgctggcagcggccgcccccggcgctcccgtcgtg
atctggggccctggcactccctcgttgatgcatgcagccaacgaaagcgtcaaggtgtcc
gaactgaacgatgcgatcgctgcctacggtgccgtggctgctgcttggccgacggtggac
tga
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