Rhodococcus erythropolis PR4: RER_60120
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Entry
RER_60120 CDS
T00881
Name
(GenBank) putative tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rer
Rhodococcus erythropolis PR4
Pathway
rer03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rer00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RER_60120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rer03019
]
RER_60120
Enzymes [BR:
rer01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
RER_60120
Messenger RNA biogenesis [BR:
rer03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RER_60120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
AbiEii
Cas3_HD
Motif
Other DBs
NCBI-ProteinID:
BAH36720
NITE:
RER_60120
UniProt:
C0ZVM6
LinkDB
All DBs
Position
complement(6492515..6493966)
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AA seq
483 aa
AA seq
DB search
MTVPTSDADRRLRLLADATATLGTLSDVLNPLGERFAEAGHELFLVGGSVRDAILGRFSG
DLDFTTDARPEKVQALLKGWVDKQWDTGIEFGTISAIKHGQEIEITTFRADAYDRVSRNP
IVEYGTTLADDLVRRDFTVNAMAMKIGADGSYTFVDPLNGMDALLAGELDTPSAPENSFN
DDPLRMLRAARFVSQLGFTLNNRVFEAIKEMASQIERITAERVQVELNKMILGMYPVDGI
NMMVDSGLAAYVLPEVPQMKLEIDEHHQHKDVYQHSLTVLQQAIDLEEGDPDLVLRWAAL
LHDIGKPDTKRNEPGGGVSFHHHEVVGAKLVRKRMRALKFSKQMVDDVSQLVFLHLRFHG
YGKGQWTDSAVRRYVTDAGELLPRLHKLVRADCTTRNKRRAAQLQATYDDIEERIARIAE
QEDLARVRPDLDGNAIMELLNIPAGPQVGKAWTFLKELRLDRGPLERDEAEAELLKWWAT
QQG
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
gtgactgtccctacctccgacgctgatcgccgcctacgactgcttgccgacgccactgca
acgctcggcacgttgtccgacgtgttgaacccgctcggtgagcgttttgccgaggccggt
cacgagctgttcctggtgggtggcagtgttcgcgacgcgatcctgggccgcttcagtggc
gatctggacttcacgacggacgccaggccggagaaggttcaggctctgctcaagggctgg
gtggacaagcagtgggacaccggcatcgagttcgggaccatcagcgccatcaagcacggc
caggagatcgagatcacgaccttccgggccgacgcttacgaccgtgtctcacgtaatccg
atagtcgagtacggaacgacgttggccgacgatctggtgcgccgcgatttcaccgtcaac
gcgatggcgatgaagatcggcgcggacggttcctacacgtttgtcgatccgctgaacggc
atggacgccctgctggccggggaactcgatacgccgtcggcgccggagaactcgttcaac
gacgatccgctgcggatgctgcgcgcagccaggttcgtctcgcagcttggtttcacgttg
aacaatcgcgttttcgaggccatcaaggagatggcgtcgcagatcgagcggatcaccgcc
gagcgtgtgcaggtggagctgaacaaaatgatcctgggcatgtacccggtggacggcatc
aacatgatggtcgactccggactggctgcatacgtgctgcccgaggttccgcagatgaag
ctcgagatcgacgagcatcaccaacacaaggacgtctaccagcactccctcaccgtgctc
cagcaggcgatcgatctcgaggaaggcgatcccgatctcgtattgcgttgggctgcactg
cttcacgacatcggcaagccggacaccaagcgcaacgaaccgggcggcggcgtcagcttc
caccaccacgaggtggttggcgccaagctggtgcgcaagcgcatgcgtgccttgaagttc
tcgaagcagatggtcgacgacgtttcgcagctcgtgttcctgcacttgcgttttcacggc
tacggcaagggacagtggaccgattcggcagtgcggcggtacgtcaccgacgcgggcgag
ctgctcccccggctgcacaagctcgtccgggccgactgcaccacgcgtaacaagcgccgc
gccgcgcagttgcaggccacgtacgacgacatcgaagagcggattgcgcgcatcgccgag
caggaagacctcgctcgcgtgcgtccggacctcgacggcaacgccatcatggaactgctc
aacatcccggccggcccgcaggtgggcaaggcatggacgttcctcaaggaactacgtctg
gatcgcggcccgctcgaacgtgacgaggccgaagccgaactgctgaagtggtgggctacc
cagcagggttag
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integrated database retrieval system
