KEGG   Rhizobium etli CFN 42: RHE_CH00126
Entry
RHE_CH00126       CDS       T00317                                 
Symbol
dnaX
Name
(GenBank) DNA polymerase III, tau subunit protein
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret03030  DNA replication
ret03430  Mismatch repair
ret03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ret00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RHE_CH00126 (dnaX)
   03430 Mismatch repair
    RHE_CH00126 (dnaX)
   03440 Homologous recombination
    RHE_CH00126 (dnaX)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ret03032]
    RHE_CH00126 (dnaX)
   03400 DNA repair and recombination proteins [BR:ret03400]
    RHE_CH00126 (dnaX)
Enzymes [BR:ret01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RHE_CH00126 (dnaX)
DNA replication proteins [BR:ret03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RHE_CH00126 (dnaX)
DNA repair and recombination proteins [BR:ret03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RHE_CH00126 (dnaX)
SSDB
Motif
Pfam: DNA_pol3_gamma3 DUF3646 DNA_pol3_delta2 AAA AAA_22 AAA_16 AAA_30 AAA_5 AAA_19 AAA_14 AAA_24 RuvB_N AAA_18 TsaE SKI SRP54 AAA_assoc_2 Rad17 DUF815 AAA_7 RNA_helicase CbiA AAA_2 nSTAND3 AAA_28 PduV-EutP Viral_helicase1 ABC_tran AAA_17
Other DBs
NCBI-ProteinID: ABC88951
RhizoBase: RHE_CH00126
UniProt: Q2KDY5
LinkDB
Position
complement(136339..138213)
AA seq 624 aa
MSDSERLSQDAASTGTGYRVLARKYRPKDFTDLMVGQEPMVRTLTNAFETGRIAQAYMLT
GVRGVGKTTTARILARALNYKTAEIDKPTIDLRTPGEHCQAIMEGRHVDVIEMDAASHTG
IDDVREIIEQVRYRPVSARYKVYIIDEVHMLSTQAFNGLLKTLEEPPEHVKFIFATTEIR
KVPITVLSRCQRFDLRRISASDLVGLFTTIAAKEGIEAEPDALAMIARAAEGSARDGLSL
LDQAIAHGAGAVQAEAVRGMLGLADRARIVDLFQHIVKGDVAGALGEFQSQYEAGANPVV
VLTDLADFTHLVTRLKYVPDAANDPSLSEIERTKAAEFAKSIAVTTLSRIWQMLLKGIPE
TEGSSRTAGAAEMVLIRLAHAAHLPAPEDAARRLAEFSGDNGGSRPSSAPSGGGGGGTRV
PYQSSVAARAPDIAPSKPQPSVPVAMLRAVPSSQPETTPVGRIEAKPAEAPKPLVKVNSV
GDIVNLATEKRDAKLKAMVRNFVRPVRIEPGRLDVSLTEGAPTTLLNELAVKLKEWTGIH
WIVSLSRDEGQPTLVEAEARTREQHVIDARQDPDVAAILAHFPGAKIIDVRVRAPEPEEE
GEVKPPAAAESEEGDILPGDDIEF
NT seq 1875 nt   +upstreamnt  +downstreamnt
atgagcgacagcgagcgactatcacaagatgccgcctcgacgggcaccgggtaccgggtg
ctggctcgcaaataccgccccaaggatttcacggacttgatggtcggccaggagccgatg
gtccgcacgctcaccaacgccttcgagaccggccgcatcgcgcaggcctatatgctgacg
ggcgtacgcggcgtcggcaagacgacgacggcgcgcatcctggcgcgggcgctgaactac
aagacggcagagatcgacaagccgacgatcgatctgcgcacgcccggcgaacactgccag
gcgatcatggaaggccggcatgtcgacgtgatcgaaatggatgccgcttcgcataccggt
atcgacgatgtaagagaaatcatcgagcaggtgcgctaccggccggtttcggcgcgctac
aaggtctatatcatcgacgaagtgcacatgctgtcgacccaggccttcaacggtctgttg
aagaccctggaagagccgccggagcatgtgaagttcatcttcgccaccaccgaaatccgc
aaggtcccgatcaccgtgctgtcgcgctgccagcgcttcgacctgcgccgcatcagcgcg
tcggatctcgtcgggctgttcacgacaatcgcggccaaggagggcatcgaggcggaaccg
gacgcgctggcgatgatcgcacgcgccgccgaaggctctgcccgcgacggcctgtcgctg
ctcgaccaggcgatcgcccatggcgcaggcgccgtgcaggcggaagcggtgcgcggcatg
ctcggccttgccgaccgcgcccggatcgtcgatctctttcagcatatcgtcaaaggcgat
gtggccggtgcactcggcgagttccagagccagtacgaggccggcgccaatccggtggtc
gtgctcaccgatcttgccgatttcacccatctggtgacgcgactgaaatatgtgccggat
gcggcaaacgacccttctctgagcgagatcgagcgcaccaaggcggcggaattcgccaag
agcattgcggtgacgacgctgtcgcgcatctggcagatgctgctgaagggcattccggaa
accgaaggctcgtcgcggacggcgggtgctgccgaaatggtgctgatccgccttgcgcat
gcggcgcatctgccggcgcccgaggatgcggcgcggcggcttgccgaattttccggcgac
aatggcggctcgcgcccttcctccgcgccttccggcggtggtggcggcggcacgcgagtg
ccctatcaaagcagtgtcgcggcacgcgcgccggacatcgcgcccagcaagccgcagcct
tcggtgccggtggcgatgctgcgcgccgtgccgagcagccagcctgagaccacgcccgtc
gggcggatcgaagcgaaaccggcagaagcgccgaagccgctcgtcaaggtcaattcggtc
ggcgatatcgtcaacctcgccaccgagaagcgcgatgcgaagctgaaggcgatggtgcgc
aatttcgtgcgcccggtgcgcatcgagcccggccggcttgacgtcagcctcaccgaaggc
gcgccgacgacgctgctcaacgaacttgccgtcaagctgaaagaatggaccggcattcac
tggatcgtcagcctcagccgcgacgagggccagccgacactggtggaggcggaagccagg
acccgggaacagcatgtcatcgatgcccgccaggaccctgacgtggcggcgatcctggcg
cattttcccggcgctaaaatcatcgacgtgcgcgtgcgggcacccgaaccggaagaagaa
ggcgaggtcaaaccgccggccgccgccgaatccgaagaaggcgacatcctgcccggcgac
gacatagaattctga

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