Rhizobium etli CFN 42: RHE_CH00808
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Entry
RHE_CH00808 CDS
T00317
Symbol
glcD
Name
(GenBank) glycolate oxidase subunit D protein
KO
K00104
glycolate dehydrogenase FAD-linked subunit [EC:
1.1.99.14
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00630
Glyoxylate and dicarboxylate metabolism
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
ret01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RHE_CH00808 (glcD)
Enzymes [BR:
ret01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.14 glycolate dehydrogenase
RHE_CH00808 (glcD)
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Gene cluster
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Motif
Pfam:
FAD-oxidase_C
FAD_binding_4
Motif
Other DBs
NCBI-ProteinID:
ABC89619
RhizoBase:
RHE_CH00808
UniProt:
Q2KC17
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All DBs
Position
846404..847843
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AA seq
479 aa
AA seq
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MSDAIPFLAPRADVLARRAAIVADLTDLLPPECLIHQARELVPFETDAFVSYRRLPLAVA
LPRTTAEVSAVMRYCHRYGIPVVPRGAGTSLSGGAIPQEDAVVLGLSKMNSILEIDLVNR
VAVVQAGVTNLNISESVSADGFFYAPDPSSQLACTIGGNIGMNSGGAHCLKYGVTTNNLL
GVRMVLVDGTVIELGGKALDAAGYDLLGLVCGHEGQLGIVTEATVRLIAKPEGARPVLFG
FESSEEAGACVADVIAAGIIPVAIEFMDKPAIEICEAFAHAGYPLDVGALLIVEVEGSEA
EMDATLKDVVEIARRHGVKTVRECQSATEAALIWKGRKSAFGATGRIADYICMDGTVPLS
QLSHVLKRTAEIVDHYGLRVANVFHAGDGNMHPLILFNANDPQDAARAEAAGNDILKLCV
DAGGCLTGEHGVGIEKRDLMRHQYSEADLAQQMAVRAAFDPGWLLNPSKVFPLEGRPAA
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacgccattccgtttcttgccccccgtgccgacgtgctggcgcgccgcgccgcg
atcgtcgccgatctgaccgatctcctgccgccggaatgcctgatccatcaggcgcgcgag
ctggtgcccttcgaaaccgacgctttcgtttcctatcgccgcctgccgctcgccgtcgcc
ctgccgcgcaccacggccgaggtttcggccgtcatgcgttattgtcaccgctacggcatt
cccgtcgtaccgcgcggcgccggcacctcgctttcgggcggcgccattccgcaggaggat
gcggtcgtgctcggcctgtcgaagatgaacagcatcctcgaaatcgacctggtgaaccgt
gtcgccgttgttcaggcgggcgtcaccaatctcaatatttcggaatccgtctccgccgac
ggcttcttctacgcgcctgatccgagttcgcagctcgcctgcacgatcggcggcaatatc
ggcatgaattccggtggcgcccactgcctgaaatatggcgtcaccaccaacaatctgctc
ggcgtccgaatggtgctggtcgacggcacggtgatcgagctcggcggcaaggcgctggat
gcggcgggttacgatctgctcggtctcgtctgcggccatgaaggccagctcggcatcgtc
accgaggcgaccgtgcgcctgatcgccaagcccgaaggtgcgcgcccggtgctcttcggc
ttcgaaagctcggaagaggcgggcgcctgcgtcgccgatgtcatcgccgccggcatcatc
cccgttgcgatcgaattcatggacaagccggcgatcgagatctgcgaggcctttgcccat
gccggctaccccctcgatgtcggcgcactcctgatcgtcgaggtcgaaggatcggaagcg
gagatggacgccacgctgaaggacgtcgtcgagatcgcccgccgccacggcgtcaagacc
gtgcgcgaatgccagtcggcgaccgaagcggcgctgatctggaagggccgcaaatccgcc
ttcggcgccaccggccgcatcgccgactacatctgcatggacggcacggtgccgctcagc
cagctgtcgcacgtgctgaagagaaccgccgagatcgtcgatcactacgggctacgcgtc
gccaacgtcttccacgccggcgacggcaacatgcatccgctgatcctcttcaacgccaat
gatccgcaggatgctgcccgcgccgaggccgccggcaacgatatcctgaagctgtgtgtc
gacgccggcggctgcctcaccggcgagcacggtgtcggcatcgaaaagcgtgacctgatg
cggcaccagtattcagaggccgatctcgcccagcagatggcggtgcgcgccgcctttgat
cccggctggctgctcaatccgtcgaaggtctttccgctggaagggcgccccgccgcatga
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