Rhizobium etli CFN 42: RHE_CH00916
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Entry
RHE_CH00916 CDS
T00317
Name
(GenBank) probable exodeoxyribonuclease VII small subunit protein
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RHE_CH00916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ret03400
]
RHE_CH00916
Enzymes [BR:
ret01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
RHE_CH00916
DNA repair and recombination proteins [BR:
ret03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RHE_CH00916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
RL10P_insert
Nbl1_Borealin_N
Motif
Other DBs
NCBI-ProteinID:
ABC89727
RhizoBase:
RHE_CH00916
UniProt:
Q2KBQ9
LinkDB
All DBs
Position
complement(966190..966441)
Genome browser
AA seq
83 aa
AA seq
DB search
MTDSAKPEVSGLSFEKAVAELESIVARLERGDVALDESIEIYERGEALKKHCETLLSAAE
NRIEKIRLDRAGKPRGVEPLDGA
NT seq
252 nt
NT seq
+upstream
nt +downstream
nt
atgactgacagcgccaagcctgaagtatcgggcctttccttcgaaaaggcggttgccgaa
ctcgaaagcatcgtcgcccggctggagcgcggcgacgtggcgctggatgaatccatcgag
atttacgagcgcggcgaagcgctgaagaaacattgtgaaacgctgctttcggccgccgaa
aaccgcatcgagaagatccggctcgaccgcgccggcaagccgcggggcgtcgagccgctg
gacggcgcctga
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