KEGG   Rhizobium etli CFN 42: RHE_CH02843Help
Entry
RHE_CH02843       CDS       T00317                                 

Gene name
ddlB
Definition
(GenBank) D-alanine-D-alanine ligase protein
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
ret  Rhizobium etli CFN 42
Pathway
ret00473  D-Alanine metabolism
ret00550  Peptidoglycan biosynthesis
ret01100  Metabolic pathways
ret01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:ret00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    RHE_CH02843 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RHE_CH02843 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    RHE_CH02843 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:ret01011]
    RHE_CH02843 (ddlB)
Enzymes [BR:ret01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RHE_CH02843 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:ret01011]
 Precursor biosynthesis
  Amino acid ligase
   RHE_CH02843 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 CPSase_L_D2 ATP-grasp ATP-grasp_3 GARS_A Arg_repressor
Motif
Other DBs
NCBI-ProteinID: ABC91611
RhizoBase: RHE_CH02843
UniProt: Q2K6C5
LinkDB All DBs
Position
complement(2967938..2968864)
Genome map
AA seq 308 aa AA seqDB search
MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFKVTTLDVARDVSEKLAALKPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKGKAKRVAAAAGIPVAESQVINR
FAFPATHPMKPPYVVKPVREGSSFGVVIVTEDQAHPPQVVSSPEWHYGEDVLVERYVYGR
ELTCGVMGDVALGVTEVVPLGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRLSDDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGQFLRWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaggccctcgaagccgaaggcttcaaggtaaccacg
cttgatgtcgcccgcgatgtttctgaaaagcttgccgcattgaagccggatgtcgtcttc
aatgcgcttcatgggccgttcggcgaggacgggaccattcagggcatcctggaatatctg
gagatcccctatacgcattcaggcgtgcttgcctcggcgcttgcgatggacaagggcaag
gcgaagcgtgtcgctgccgccgccgggatccctgtcgccgaatcgcaggtcatcaaccgt
ttcgccttccctgcgacacatccgatgaagccgccttatgtggtgaagccggtgcgcgaa
ggctcgagcttcggcgtcgtcatcgtcaccgaagatcaggcgcatccgccgcaggtcgtc
agctcgcccgagtggcattatggcgaggacgttctcgtcgagcgctacgtttacggccgc
gagctcacctgcggggtcatgggtgatgtcgcgctcggcgtcacggaagtggtgccgctg
ggacacaatttttatgattacgattccaagtacgctgcgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgccgcggcgtcagtcggtccgactttcgttacgacgatcgtctctcc
gacgacggcgaaatcatctggctggaagtcaatacccagcctggcatgactccaacctcg
ctcgtgcccgaaatggccggtcatgccggctattcgtttggtcagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga

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