Rhizobium etli CFN 42: RHE_CH03895
Entry
RHE_CH03895 CDS
T00317
Gene name
sdhA
Definition
(GenBank) succinate dehydrogenase, flavoprotein subunit protein
KO
K00239
succinate dehydrogenase / fumarate reductase, flavoprotein subunit [EC:
1.3.5.1
1.3.5.4
]
Organism
ret
Rhizobium etli CFN 42
Pathway
ret00020
Citrate cycle (TCA cycle)
ret00190
Oxidative phosphorylation
ret00650
Butanoate metabolism
ret01100
Metabolic pathways
ret01110
Biosynthesis of secondary metabolites
ret01120
Microbial metabolism in diverse environments
ret01130
Biosynthesis of antibiotics
ret01200
Carbon metabolism
Module
ret_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
ret_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RHE_CH03895 (sdhA)
00650 Butanoate metabolism
RHE_CH03895 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RHE_CH03895 (sdhA)
Enzymes [BR:
ret01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RHE_CH03895 (sdhA)
1.3.5.4 fumarate reductase (quinol)
RHE_CH03895 (sdhA)
SSDB
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
FAD_binding_3
DAO
GMC_oxred_N
HI0933_like
Other DBs
NCBI-ProteinID:
ABC92641
RhizoBase:
RHE_CH03895
UniProt:
Q2K3E5
LinkDB
Position
complement(4128706..4130547)
AA seq
613 aa
MAPTSPVQNGKAYKYVDHSYDVIVVGAGGAGLRATLGMAEQGFRTACITKVFPTRSHTVA
AQGGIAASLRNMTPDSWQWHLYDTVKGSDWLGDVDAMQYLTMEAPKAVYELEHYGVPFSR
NEEGKIYQRPFGGHMQNYGEGPPVQRTCAVADRTGHAILHTLYGQSLRNNAEFFIEYFAL
DLIMSEDGSRCTGVVAWCLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDGGGMV
ARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKDLASR
DVVSRCMTLEIREGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVTREPI
PVLPTVHYNMGGIPTNYWGEVLNADGANPERIIPGLMAVGEAGCASVHGANRLGSNSLID
LVVFGRAAAIRAGEVIDRAAPIPHLNVAACDKIMDRFDGLRHASGGTPTADLREKMQRAM
QEDAAVFRTQESLESGCRRISAIWQEMRDIKVTDRSMVWNSDLVETLELQNLMANAITTI
YGAEARKESRGSHAREDYTEGAFAGRDDVNWRKHTLAWVNEAGDVKLDYRPVHTELIAEG
IDPHKIEPKARVY
NT seq
1842 nt
+upstream
nt +downstream
nt
atggcaccgacttcacccgttcagaatggcaaggcctacaaatatgtcgatcactcctat
gacgtgatcgtcgtcggcgccggcggcgcgggcttgcgcgcgacgctcggtatggccgag
cagggtttccgcaccgcctgcatcaccaaggttttcccgacccggtcgcatacggttgct
gcccagggcggcatcgccgcctcgctgcgcaacatgacgccggatagctggcagtggcat
ctctatgataccgtcaagggttccgactggctcggcgacgtcgacgccatgcagtatctg
accatggaagcgccgaaggcagtctatgagctcgagcattacggcgtgccgttctcgcgt
aacgaggaaggcaagatctaccagcgccctttcggcggccacatgcagaattacggcgaa
ggtccgccggtgcagcgcacctgcgccgttgccgaccgcaccggccatgccatcctgcat
acgctctacggccagtcgctgcgcaataacgccgaattcttcatcgaatatttcgcgctc
gacctgatcatgtctgaggacggcagccgctgcaccggtgtcgtcgcctggtgcctcgat
gacggtacgatccatcgtttcgccgccaagatggtggtgctggcgaccggcggctacggc
cgtgcctatttctcggcgacctcagcccatacctgcaccggcgacggcggcggcatggtg
gcgcgcgccggcctgccgctgcaggacatggaattcgtccagttccacccgaccggcatc
tacggttcgggctgtctgatcaccgaaggcgcgcgcggcgaaggtggctacctcgtcaac
tccgagggcgagcgcttcatggagcgttatgcgccttcggccaaggatcttgcctcgcgc
gatgtcgtttcgcgctgtatgacgcttgagatccgcgaaggccggggcgtcggcaagaac
aaggaccacatcttcctgcatctcgaccatctcgatccggccgtgctgcatgagcgcctg
ccggggatttccgagagcgccaagatcttcgccggcgtcgacgtcacgcgcgagccgatc
ccggttctgccgaccgttcattacaatatgggcggcattcccaccaattattggggcgag
gtgctgaacgccgacggtgccaatccggagcggatcattcccggccttatggctgtgggt
gaagccggctgcgcctcggtgcacggcgccaaccgcctcggctcaaactcgctgatcgac
ctcgtggtcttcggccgcgccgctgcgatccgtgccggcgaggtgatcgaccgcgcagcg
ccgatcccgcatctcaatgttgcggcctgcgacaagatcatggaccgcttcgacggtctg
cgccacgccagcggcggcacgccgacggctgacctgcgcgagaagatgcagcgcgccatg
caggaagacgccgccgtcttccgcacgcaggaatcgctggaatccggttgccggcgcatt
tcggcgatctggcaggaaatgcgcgacatcaaggtcacggaccgatcgatggtctggaac
tcggatctggtggaaacgctggagctgcagaacctgatggccaacgccatcacgacgatc
tacggcgccgaggcccgcaaagagagccgcggttcgcatgcccgcgaggattataccgag
ggcgcattcgccggccgcgacgacgtcaactggcgcaagcatacgcttgcctgggttaac
gaggcaggcgacgtcaagctcgattaccggccggttcacaccgagctgatcgccgagggc
atcgatccgcacaagatcgagccaaaagctcgcgtctactga
DBGET
integrated database retrieval system
