Rhizobium etli CFN 42: RHE_PF00013
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Entry
RHE_PF00013 CDS
T00317
Name
(GenBank) putative long-chain-fatty-acid--CoA ligase protein
Organism
ret
Rhizobium etli CFN 42
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABC93907
UNAM_f:
RE1PF0000013
RhizoBase:
RHE_PF00013
UniProt:
Q2JZS9
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Position
p42f:12135..13652
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AA seq
505 aa
AA seq
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MPIHRELLRHVTERPEKPAVVIDGGSLSYGELYSRACAIHRFIQALPRSKRRSFDLPGVE
KLLAVSLGNHIGFAGYFVAATALPNACAVIDPMMPEARIERIVERLAPDVLVVNDAACPS
AEIGRGLGIPVIVAGTEPFSLTAKTDAFPVDAEGIFLIGFTSGTTAEPKAYYRSRQQWRR
SLERGRLVFELQDAPSTLCPGALAHGLALYALVEALDAGATFHSVGKWDAGTVAQILSSG
IERLVAVPTHVAGIARAWAGEPMTSLRDVLTAGSKLNLGEIESMRRLFPKARIREYYGAS
EIGFMTVSTLAGGASDFPIDRVGQAYPGIKISIRDPEENDVGTDVPGTIFVDSDLIADGY
LWGDDGQAFRVTPAGATVGDLGEIDANGMLRVIGRAGGMMITGGNNVYPAEVESALKSCP
DVEDAVVFGLPDAYYGQRIVAVVSGEVTDAKILADHCAGKLARFKIPRQFYHIGSWPMTS
SGKIARGQVEASVISGDDLVLRLSA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgccgatccatcgagagcttcttcgacacgtcacggaaagaccggaaaagccggcggtt
gtgatcgacggcggctccctgagctatggcgaactctatagccgcgcctgcgcgatccac
cggttcatccaagcacttccgcgctcgaaacgccgttcattcgatctgcccggcgtcgag
aagcttctggcggtcagcctcggcaatcacatcggctttgccgggtatttcgttgccgcc
acggcgctgccgaacgcctgcgcggtcatcgatccaatgatgccggaagcgagaatcgag
cgcatcgttgagcgcctggcgcctgacgtgcttgtcgtcaacgatgctgcgtgcccgagc
gccgagatcggccgcgggctcggcattcctgtgatcgtcgccggaaccgagcccttctcc
cttacagcaaaaacagacgcctttccggtcgatgccgagggaattttcctgatcggcttc
acctcgggcacgacagccgagccgaaggcctattatcgctcgcgccagcagtggcgccgg
agccttgagcgggggcgtctcgttttcgaactccaggacgcaccctcgacgctgtgcccg
ggagcgctcgcgcatgggctcgcgctttatgcgctggtcgaggcgctcgatgccggagca
accttccattcggtggggaaatgggatgccggcacggtcgcgcagattctgtcttccggg
atcgaacggctggtcgccgtgcccacccatgtagcaggcatcgcccgggcatgggcgggc
gagccgatgacgtccttgcgcgacgtgctgaccgccggctccaagctgaacctcggcgag
atcgaatccatgcgccgcctttttccgaaggcgcgcatccgggaatattacggcgcctcc
gagatcggcttcatgacggtctcgacgcttgccggcggcgcgagcgattttccgatcgat
cgggtcgggcaagcctatcccggtatcaagatctccattcgcgaccctgaggaaaacgac
gtcggcaccgatgtgcccggcaccatcttcgtcgacagcgacctgatcgccgacggctat
ctctggggcgacgacggccaggcgttccgggtcaccccggcgggcgcgaccgtcggcgat
ctcggcgagatcgatgcgaacggcatgctgcgggtgatcggtcgggcagggggcatgatg
atcacgggcggcaacaacgtctatcccgccgaggtcgagagcgcactcaaaagctgtccc
gacgtcgaggatgccgtcgtcttcgggctgccggatgcctattacggccaacggatcgtc
gccgtcgtctcgggcgaggtgacggacgcgaaaatcctcgccgaccattgcgcgggcaag
cttgcaaggttcaagattcccaggcagttctaccatatcggctcctggccgatgacgagc
agcggcaagatcgcgcgcggccaggtggaagcatcggtcatttcgggagatgatcttgtc
ctacgcctatcagcctga
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