Rhizobium etli CFN 42: RHE_PF00393
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Entry
RHE_PF00393 CDS
T00317
Name
(GenBank) probable glycine betaine/L-proline ABC transporter, permease protein
KO
K02001
glycine betaine/proline transport system permease protein
Organism
ret
Rhizobium etli CFN 42
Pathway
ret02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
RHE_PF00393
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ret02000
]
RHE_PF00393
Transporters [BR:
ret02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
RHE_PF00393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ABC94283
UNAM_f:
RE1PF0000393
RhizoBase:
RHE_PF00393
UniProt:
Q2JYQ3
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All DBs
Position
p42f:complement(445449..446297)
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AA seq
282 aa
AA seq
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MDTSVLTDLFDEWTDSALEWVSDNGEFLFDYIRQVLEGLYDGILWLLELPPFYVIAIIVA
LIGWRLVNVWFAALSGVALALCFSMGLWPETMSTLALVLTATVIALAIGIPIGIAAGFFT
ALDRFMEPGLDLIQTLPPYIYLLPAIALLGYGPATALIATVIVAVPPAVRLTSLGIRMTP
KEFIELGEALGMTPGKMFFKIRLPFALPSMMAGINQSLMMAFGMVVIAGIVGSGGLGETI
YGAIRTLDIATSINAAIAIVVLTMVIDRITQSAARLGTGRKS
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggatacttcagtcttaaccgatctgttcgacgaatggacggactccgcgctcgaatgg
gtgagcgacaacggcgagttcctcttcgactatatcaggcaggtgctcgagggcctctat
gacgggatcctctggctccttgagcttccgccgttctacgtgatcgcgatcatcgtggcg
ctgatcggctggcggctggtcaatgtctggttcgcggcgctcagcggcgtcgcgctggcg
ctctgcttttcgatgggactctggccggagacgatgagcaccctggcgctggtcctgaca
gccacggtgatcgccttggcgatcggcatcccgatcggcattgcggcgggcttcttcacc
gctcttgaccgcttcatggagccgggtctcgatctcatccagacgcttccgccatacatc
tacctgctgccggcgatcgcccttctcggctacggaccggcgacggcgttgatcgcgacc
gtgatcgtcgccgtgccgccggcggtccgcctgacctcgctcggtatccgcatgaccccc
aaggagttcatcgaacttggcgaggcgctcgggatgactccgggaaagatgttcttcaag
atccgccttccctttgccctgcccagcatgatggcgggcattaaccaaagcctgatgatg
gccttcggcatggtcgtcatcgccggcatcgtcggttcgggcgggctcggagagacgatc
tacggcgcgatcaggacgctcgatatcgcgacttctatcaatgcggcgatcgccatcgtg
gtattgaccatggtgattgaccgaataacgcagagcgccgctcgcttgggaacggggagg
aagtcatga
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