Rhizobium etli CFN 42: RHE_PF00462
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Entry
RHE_PF00462 CDS
T00317
Symbol
rpoI
Name
(GenBank) RNA polymerase sigma factor protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
ret
Rhizobium etli CFN 42
Brite
KEGG Orthology (KO) [BR:
ret00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ret03021
]
RHE_PF00462 (rpoI)
Transcription machinery [BR:
ret03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RHE_PF00462 (rpoI)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
HTH_23
Sigma70_r4
HTH_24
HTH_28
KORA
HTH_11
P53_C
Motif
Other DBs
NCBI-ProteinID:
ABC94352
UNAM_f:
RE1PF0000462
RhizoBase:
RHE_PF00462
UniProt:
Q2JYI4
LinkDB
All DBs
Position
p42f:complement(521767..522423)
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AA seq
218 aa
AA seq
DB search
MRASHRDVNGNAVVNAMIENKDKLLKTIESVIKSRSYSEDIFQDGVIKAYGVNVEGVRCP
IGYAFRMVYNLALDESRRRRQQMNNYRSIDQVQEMTAPIPTVLDQLVAAETLRDVLASLE
ALPKRTNDAFIRHRLNGVPQKDIAAELGVSRTLVNFMIKAAEQHCHLAMTEPARPDHERP
REITASRRAAPAANRSTAIPALPAQQRNGSSARSRRTG
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcatcgcatcgtgatgtgaacggaaatgccgtggtcaacgccatgatcgaaaac
aaggacaagctcctcaaaacgattgaaagcgttatcaaatcaaggtcatattctgaggat
atatttcaggatggtgtcatcaaagcttatggggtcaatgtcgagggcgtccgttgcccg
atcggctatgccttccggatggtctataacctcgcactcgacgagagccgccggcgccgc
cagcagatgaacaactataggtcgatcgaccaggttcaggaaatgacggcgcccattccc
accgtgctcgatcaactggtcgccgccgaaaccctgcgcgacgtgctggcctcgctcgag
gcgctgccgaagcgcaccaacgacgccttcatccgccatcgcctgaacggcgtgccgcag
aaggatatcgcggccgagctcggcgtttcccgaacgctcgtcaatttcatgatcaaggcg
gcggagcagcattgccatctggcaatgaccgagcctgcccgccccgatcacgagcgcccg
cgggaaatcaccgcttcgcggcgtgcagcgcctgctgcaaatcgttccacagcaattccg
gctcttccagcccaacagcgaaacggatcgtctgctcgctcacgccgaaccggatga
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