Rhizobium esperanzae: AMJ99_CH01747
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Entry
AMJ99_CH01747 CDS
T05681
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rez
Rhizobium esperanzae
Brite
KEGG Orthology (KO) [BR:
rez00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rez03032
]
AMJ99_CH01747 (topA)
03400 DNA repair and recombination proteins [BR:
rez03400
]
AMJ99_CH01747 (topA)
Enzymes [BR:
rez01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMJ99_CH01747 (topA)
DNA replication proteins [BR:
rez03032
]
Prokaryotic type
DNA Topoisomerases
AMJ99_CH01747 (topA)
DNA repair and recombination proteins [BR:
rez03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMJ99_CH01747 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
zf-C4_Topoisom
Peptidase_M35
Motif
Other DBs
NCBI-ProteinID:
ANL03320
LinkDB
All DBs
Position
complement(1736769..1739423)
Genome browser
AA seq
884 aa
AA seq
DB search
MNVVVVESPAKAKTINKYLGSGYKVLASFGHVRDLPAKDGSVLPDQDFEMLWEVDGASAK
RMKDIADAVKSSDGLFLATDPDREGEAISWHVLDMLNKKRVLNGKSVKRVVFNAITKKAV
LDAMADPRDIDVPLVDAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVALRLVCDR
ESEIERFISEEYWNISALLKTPRGDEFEARLVSAHGKRLQPRAIGNGEDAGRLKALLEGA
SYIVDTVEAKPVKRNPGPPFTTSTLQQAASSNLGFSASRTMQIAQKLYEGVDIGGETVGL
ITYMRTDGVQMAPEAIDAARRAILDQFGERYLPEKARFYSTKAKNAQEAHEAIRPTDFYR
SPDRVRKFLDADQIRLYELIWKRGIASQMASAEIERTTAEITAENKGEKAGLRAVGSVIR
FDGFIAAYTDQKEDGEQSDDGDEDGRLPEINARETLAKQKINSTQHFTEPPPRYSEASLI
KKMEELGIGRPSTYAATLATLRDRDYVTIDKRKLIPQAKGRLVTAFLESFFTKYVEYDFT
ADLEEKLDRISAGELNWKQVLRDFWKDFFAQIEDTKELRVTNVLDSLNEALAPLVFPKRE
DGGDPRICQVCGTGNLSLKLGRYGAFVGCSNYPECNYTRQLSSENGGEAEGVALNEPKSL
GTDPTTGEELTLRSGRFGPYIQRGDGKEAKRASLPKGWKPEDIDYEKAMALISLPRDIGK
HPETGKMISSGIGRYGPFLLHDGSYANLETVEDVFSVGLNRAVTLIAEKANKAPGRGARG
TPAALKTLGDHPDGGAITVRDGKYGPYVNWGKVNATLPKGKDPQAITIEEALALITEKAG
KAPAGKTARAKAKPKAAAAEAKATKTAAKPKATKAKAPAKSKKS
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttgtagtggtggaatcgcctgccaaggccaagacgatcaataagtatctgggt
tcgggatacaaagtgctcgcctccttcggccatgtgcgcgatctgcctgccaaggacggc
tccgttcttcccgatcaggatttcgaaatgctctgggaggtcgacggcgcttcggccaag
cggatgaaggacatcgccgatgcggtgaagtcctccgacgggctgtttctcgcgaccgac
cccgatcgcgaaggcgaagcgatttcctggcacgtcctcgacatgctgaacaagaagcgg
gtgctgaacggcaagtccgtcaagcgcgtcgtcttcaacgcaatcaccaagaaggccgtc
ctcgatgcgatggccgatccgcgcgatatcgacgtgccgctggtcgacgcctatctagcg
cgccgcgcgctcgactatctcgtcggtttcaatctttcgccggtgctgtggcgcaagctg
ccgggcgcgcgttcggccggccgcgtccagtcggtcgcgcttcgtctggtctgcgaccgc
gaatccgagatcgagcgcttcatatcggaagaatactggaacatttcggcgctgctgaag
actccccgcggcgacgagttcgaggccaggctggtttctgcgcacggcaagcgactgcag
ccgcgcgcgatcggcaacggcgaggatgcgggccgcctgaaggccctgctcgaaggcgcc
agctatatcgtcgacacggtcgaggcaaaaccagtcaagcgcaacccgggaccgccgttc
accacctcgacgctgcagcaggccgcctcctccaatcttggcttctccgcctcgcgcacg
atgcagatcgcccagaagctctatgagggcgtcgatatcggcggcgagaccgtcggtctt
atcacctatatgcgaaccgacggcgttcagatggcccccgaagcgatcgacgcagcgcgg
cgtgccatcctcgaccagttcggcgaacgctacctacctgagaaggcccgcttctactcg
accaaggcgaagaacgcccaggaggcgcacgaggcgatccgcccgaccgatttttaccgc
tctccggaccgcgtgcgcaaattcctcgacgccgatcagatcaggctctacgagctaatc
tggaagcgtggcatcgccagccagatggcttcggccgagatcgagcgcacgacggccgaa
atcacagccgagaacaagggcgagaaggccggcctgcgcgcggtcggttcggtcatccgc
ttcgacggcttcatcgccgcctataccgaccagaaggaggacggcgagcagagcgacgac
ggcgacgaggatggtcgccttccggagatcaatgcgcgcgagacgctcgccaagcagaag
atcaattcgacccagcatttcaccgaaccgccgccgcgttattcggaagcttcgctgatc
aagaagatggaagagcttggcatcggccgtccctcgacctatgcagccacactggcgacg
ctgcgcgaccgcgactatgtgacgatcgacaagcgcaagctgatcccgcaggccaagggt
cggctggtgacggccttcctcgaaagcttcttcaccaaatatgtcgaatatgatttcacc
gccgacctcgaggagaaactcgaccgaatttccgccggtgaattgaactggaagcaggtg
ctgcgcgatttctggaaggatttcttcgcgcagatcgaagacacgaaggaactgcgcgtc
accaacgtgctcgattctttgaacgaggcgctggcgccgctcgtcttcccgaagcgcgag
gatggcggcgacccgaggatctgtcaggtctgcggtactggcaacctttccctgaagctt
ggcagatacggcgccttcgtcggctgttcaaattatccggaatgcaactacacccgccag
ctttcttcagaaaacggcggagaagcggagggtgtcgcgctcaacgagccgaagagcctc
ggcaccgatccgacgaccggcgaggaactgacgctgcgttccggccgcttcggaccctat
atccaacgcggcgacggcaaggaggccaaacgcgcctcgctgccgaagggctggaagcct
gaggatatcgactatgaaaaggcgatggcgctgatctcgctgccgcgcgatatcggcaaa
catcccgaaaccgggaagatgatctcgtcgggcatcggccgctacgggccgttccttctg
catgacggctcctacgccaatctggagaccgtcgaggatgtcttctccgtcggcctcaat
cgagccgtgacgctgattgccgaaaaagccaacaaggcgccgggccgcggcgcgcgcggt
acgccggcggctctgaagacgctcggcgaccatcccgacggcggcgccatcaccgttcgc
gacggcaaatacggcccctatgtcaactggggcaaggtcaacgcgaccctgccgaagggc
aaggatccgcaggcgatcaccatcgaggaggcgcttgcgctgatcaccgaaaaggccggc
aaggccccggccggcaagacggccagggcgaaagccaagccgaaggcggccgctgccgaa
gccaaggcaaccaagacggccgccaagccgaaggcaacgaaggcgaaggcgcccgcgaaa
tcgaaaaagagctga
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