KEGG   Rhizobium esperanzae: AMJ99_CH03008Help
Entry
AMJ99_CH03008     CDS       T05681                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rez  Rhizobium esperanzae
Pathway
rez00473  D-Alanine metabolism
rez00550  Peptidoglycan biosynthesis
rez01100  Metabolic pathways
rez01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rez00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    AMJ99_CH03008 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AMJ99_CH03008 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AMJ99_CH03008 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rez01011]
    AMJ99_CH03008 (ddl)
Enzymes [BR:rez01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AMJ99_CH03008 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:rez01011]
 Precursor biosynthesis
  Amino acid ligase
   AMJ99_CH03008 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp ATP-grasp_3 GARS_A CPSase_L_D2 Arg_repressor
Motif
Other DBs
NCBI-ProteinID: ANL04534
LinkDB All DBs
Position
complement(2979428..2980354)
Genome map
AA seq 308 aa AA seqDB search
MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFKVTTIDVARDVSEKLAALRPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKRVAAAAGIPVAESQVINR
FAFPSIHPIKPPYVVKPVREGSSFGVVIVTEDQAHPPQVASSPEWRYGEEVLVERYVYGR
ELTCGVMGETALGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaggccctcgaggccgaaggcttcaaggtaaccacg
atcgatgtcgcccgcgatgtttccgaaaagcttgccgcattgaggcctgatgttgtcttc
aatgcgcttcatgggccgttcggtgaggacgggaccatccagggcatcctggaatatctg
gagatcccgtacacgcattcaggtgtgcttgcctcggcgctggcaatggataaggacaag
gcgaagcgtgtcgctgccgccgccggcatccccgtcgccgaatcgcaggtcatcaaccgt
ttcgcctttccttcgatacatccgataaagccgccttatgtggtgaagcctgtgcgcgag
ggctcgagtttcggcgtcgtgatcgtcaccgaagatcaggcgcatccgccccaggtcgcc
agctcgcccgaatggcgctatggcgaagaggtgctggtcgaacgctatgtctacggccgc
gagctcacctgcggcgtcatgggcgaaactgcgctcggtgtcaccgaggtggtgccgcag
ggacacaatttttatgattacgattccaagtatgcggcgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagccaggcatgactcctacctcg
ctcgtgcccgaaatggccggtcatgccggctattcctttggtgagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga

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