KEGG   Rhodococcus fascians D188: A3L23_03703
Entry
A3L23_03703       CDS       T04328                                 
Symbol
nei1_3
Name
(GenBank) Endonuclease 8 1
  KO
K05522  endonuclease VIII [EC:3.2.2.- 4.2.99.18]
Organism
rfa  Rhodococcus fascians D188
Pathway
rfa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    A3L23_03703 (nei1_3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rfa03400]
    A3L23_03703 (nei1_3)
Enzymes [BR:rfa01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     A3L23_03703 (nei1_3)
DNA repair and recombination proteins [BR:rfa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     A3L23_03703 (nei1_3)
SSDB
Motif
Pfam: H2TH zf-FPG_IleRS Fapy_DNA_glyco UBA_6 NFACT_N
Other DBs
NCBI-ProteinID: AMY55021
UniProt: A0A165MJA5
LinkDB
Position
3873630..3874358
AA seq 242 aa
MEASSPQGRFVSGAALIDGLVLEKAEAWGKHLLHRYESDLIVHIHLGLYGKFTEHAVPLD
DPVGAVRLRIVGEKYGADLRGPTACEIYTEQQVDALLARLGPDPLRKDADPDAAWARISK
SRTAIGTLLMDQKVLAGVGNVYRAEILFRHEINPMRPGKDLDRAEWDAIWLDLVDLMAVG
VRRGRIITIRPEDDHGDTYGARRPRSYVYRREGLPCRVCGAEILHSTMQARNLFWCPVCQ
AT
NT seq 729 nt   +upstreamnt  +downstreamnt
gtggaggcgagcagtccccagggacggttcgtttccggtgccgcgctgatcgacggcctc
gtcctcgagaaggccgaggcgtggggcaagcatctgctgcaccgctacgaatccgacctg
atcgtgcacattcacctcggcctgtacggaaagttcaccgaacacgctgtgccactggat
gatccggtcggcgcggtgcgtctgcgcatcgtgggggagaagtacggtgccgacctccgc
ggcccgacggcctgcgagatctacaccgagcagcaggtagacgccctcctggcgcgtctg
gggccggacccgctccgcaaggacgccgacccggatgcggcctgggcacgaatatccaag
tcacgcacggccatcggcacgttgctgatggatcagaaggtgctcgccggcgtcggcaac
gtctaccgcgccgagatcctcttccggcacgagatcaacccgatgcggcccggaaaggac
ctcgaccgagccgagtgggacgccatctggctcgatctcgtggacctcatggccgtcggt
gtccgacgcgggcgcatcatcaccatcaggcccgaggacgatcacggtgatacctacggt
gcccgccgaccgcgttcgtacgtctaccgcagggaaggcctcccgtgccgcgtgtgcgga
gccgagatcctgcactcgacgatgcaggcgcgaaacctgttctggtgccccgtctgtcag
gcgacctag

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