KEGG   Rickettsia felis: RF_1035Help
Entry
RF_1035           CDS       T00252                                 

Gene name
ddlB
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rfe  Rickettsia felis
Pathway
rfe00473  D-Alanine metabolism
rfe00550  Peptidoglycan biosynthesis
rfe01100  Metabolic pathways
rfe01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rfe00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    RF_1035 (ddlB)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RF_1035 (ddlB)
 09160 Human Diseases
  09175 Drug resistance: Antimicrobial
   01502 Vancomycin resistance
    RF_1035 (ddlB)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rfe01011]
    RF_1035 (ddlB)
Enzymes [BR:rfe01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RF_1035 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:rfe01011]
 Precursor biosynthesis
  Amino acid ligase
   RF_1035 (ddlB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 CPSase_L_D2 GARS_A
Motif
Other DBs
NCBI-ProteinID: AAY61886
UniProt: Q4UKP1
LinkDB All DBs
Position
complement(1097605..1098570)
Genome map
AA seq 321 aa AA seqDB search
MNKYQTHWVEHSEVKILSTTGKKHIALVAGGMSAEREVSLVSSEGVSKALIELGYKVTFI
DMGADIAVKLQEIKPDIVFNCLHGTYGEDGCLPGLLNIMRIPYTHSGVLSSALAFDKIHS
RSWFLTNNINMAESIIVNKSDNIKSDPVKRPYVIKPLTQGSSIGVEVIFEEDDFNFADYN
FPYGYQVIIEQYIKGRELQVAVLNGKALGALEIKLLKNRFYDYETKYTEGFAEHLCPAPL
PTNLYEKLLVESEKIYKTMNCKGPARAEFILEEQTNKLYALEINTHPGMTPLSIVPEIAA
YAGINFTNLIEEIIKTASFES
NT seq 966 nt NT seq  +upstreamnt  +downstreamnt
atgaataaatatcaaacacattgggtggaacattctgaagtcaaaatattaagtactacc
ggtaaaaaacatatagcgttagtagcgggcggtatgtctgctgagcgtgaagtatcctta
gtatcaagcgaaggagttagtaaagccttaattgaattaggatataaagttacctttatt
gatatgggagcggatattgcggttaaattacaggaaataaaacctgatattgtttttaac
tgcctacacggtacgtatggtgaagacggttgcttgcctggattacttaatataatgcgg
attccttatactcatagcggcgtgttatcttcagctttagcattcgataaaatacattct
aggagctggtttttaacgaataatattaatatggctgaaagtattatcgtaaacaaaagc
gataatataaaaagcgatcctgtgaagcgaccatatgtaattaagcctcttacgcaaggt
tcaagtatcggtgttgaggtgatatttgaggaagatgattttaactttgccgattataat
ttcccttacggttatcaggtgataatagagcaatatataaaaggacgagagttgcaagta
gcggtattaaacggcaaagctcttggggctttagaaattaaattactaaagaatcgtttc
tatgattatgaaactaaatataccgaaggatttgctgagcatctttgtcctgctccgcta
cctactaatttatatgaaaaattacttgtagaatcagaaaaaatttataaaacaatgaat
tgtaaaggtcctgctagagcagaatttattttagaagagcagacaaacaaattatatgct
ttggagataaatactcacccaggtatgacgcctttatcaatagtgccagaaattgcagct
tatgcagggataaattttactaacttaattgaagaaattataaagacggcaagctttgaa
tcatga

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