Rickettsia felis: RF_1078
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Entry
RF_1078 CDS
T00252
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
rfe
Rickettsia felis
Pathway
rfe03030
DNA replication
rfe03430
Mismatch repair
rfe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rfe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RF_1078 (holA)
03430 Mismatch repair
RF_1078 (holA)
03440 Homologous recombination
RF_1078 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rfe03032
]
RF_1078 (holA)
03400 DNA repair and recombination proteins [BR:
rfe03400
]
RF_1078 (holA)
Enzymes [BR:
rfe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RF_1078 (holA)
DNA replication proteins [BR:
rfe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RF_1078 (holA)
DNA repair and recombination proteins [BR:
rfe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RF_1078 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_2
Wx5_PLAF3D7
Motif
Other DBs
NCBI-ProteinID:
AAY61929
UniProt:
Q4UKJ8
LinkDB
All DBs
Position
complement(1145074..1146039)
Genome browser
AA seq
321 aa
AA seq
DB search
MKFYFSQIGRLFELIKAGKIRALLLYGPDKGYIEKIYKHLVKSLNMLQTSIEYSELNISS
LEILLNSPNFFGQKELIKIRSVGNSIDKNLKTILSSDYINFPVFIGEEITSSGSFKKFFE
TEEYLAAVACYHDDEAKIERIILGKVEKTNKIISKEAITYLKAHLKGDHDLICSEINKLI
YFIHDRREITLNDVLKVISSEITANGSDLAMYFSKKDYSNFLQELEILKKQNINEVLIIR
ALIRHYLNLYIVLSKIKNGESLELAIKSLSPPIFYQYINDFTKIANSLSLTECLQTLKLL
QQAEVDYKLNPAGFDLLQSIL
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttatttttcacaaataggtagattatttgaactaataaaagccggaaagatt
agagctcttttactatacggtcctgataaaggctatatagaaaaaatttataagcattta
gtaaaaagcttaaatatgctacaaacttctatagaatactcagagcttaatatttcatct
ttagaaatattacttaattcgcctaatttttttggtcaaaaagaattaattaaaattaga
tcggttgggaattcaattgataagaatttaaaaacaattctaagcagtgattatataaat
tttcctgtatttataggtgaggaaattacttcaagcgggagctttaaaaagttttttgaa
acagaagaatatttagcggcagttgcttgttatcatgacgatgaagcaaaaattgaacga
attattttaggtaaagtagaaaaaactaataaaattataagtaaagaggctatcacttat
ttaaaagctcatttaaaaggtgatcatgatttaatttgtagcgaaataaataaattgata
tattttattcatgatcgaagagaaattactttaaacgatgttctaaaagttataagtagc
gaaattacggcaaacggcagtgatttagcaatgtatttttcaaaaaaagattatagtaat
tttctgcaagagctggaaatattaaaaaaacaaaatatcaatgaagttttaattattaga
gcattaataaggcattatttaaatttatatatagttttgtcgaaaataaaaaacggtgag
agtttggaactcgcaataaaatcattatcaccaccgattttctatcaatatattaatgat
tttacaaagatagcaaacagtcttagcctaactgaatgtttacagactttaaaactgtta
cagcaagcggaggtagattataaattaaatcctgctggtttcgatttattacaaagtata
ctttaa
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