Reinekea forsetii: REIFOR_02340
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Entry
REIFOR_02340 CDS
T05208
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
rfo
Reinekea forsetii
Pathway
rfo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rfo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
REIFOR_02340 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rfo03019
]
REIFOR_02340 (recQ)
03400 DNA repair and recombination proteins [BR:
rfo03400
]
REIFOR_02340 (recQ)
Enzymes [BR:
rfo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
REIFOR_02340 (recQ)
Messenger RNA biogenesis [BR:
rfo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
REIFOR_02340 (recQ)
DNA repair and recombination proteins [BR:
rfo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
REIFOR_02340 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
DUF5372
Motif
Other DBs
NCBI-ProteinID:
ATX77471
UniProt:
A0A2K8KUE7
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All DBs
Position
2541547..2543346
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AA seq
599 aa
AA seq
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MQDATQILNQVFGYTAFRPPQGEVIETLLGGGDAFVLMPTGGGKSLCFQIPALARPGIGI
VISPLIALMQDQVDALCQSGVRAACLNSTMPPGHNAEIERRAVAGDIDILYIAPERLTQA
QTLTWLAQLQISLFAIDEAHCVSQWGHDFRSDYLKLSLLHERFPTIPRIALTATADERTR
AEIIERLQLGNARTFISSFDRPNIDYRISQKLKPKDQLLDFIRQEHAEHAGIVYCLSRKK
VEATALWLQQQGFNALPYHAGLDATVRQTNQRRFLTEEAVIIVATIAFGMGIDKPDVRFV
AHLDLPKSVEAYYQETGRAGRDGQAATAWMVYGLEDVIKLKQMMAGSDGDEQFKRLEQQK
LNAMLGLAEITSCRRQVLLRYFGDRLPEPCGNCDNCLSPVATWDGTDASRKALSCVFRTG
QRFGVGHLIDVLRGKNTDKVRQFRHDQVSTFAIGQDLSDTQWRSVYRQLVARGLINVLDE
YGQLQLAEPSRALLKGESRIELRLDKAPSKTTRPGKSRTSVDIPAADSALWDALRACRSA
IAKAQKVPPYVIFHDATLQQMLSVRPQSLAALGSIAGIGDKKREQYGAAFLAVLADFAA
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacgcgacgcaaattctgaatcaggtatttggctataccgccttccgcccaccg
cagggggaggtcatcgagacgctgctcggcggcggcgatgcctttgtgttgatgcccacc
ggcggtggtaagtcgctctgttttcaaattccggcgctggcacgaccgggcatcggcatc
gttatttcgccactcattgcgctgatgcaagaccaggtcgatgccctgtgccaatccggc
gtacgcgccgcctgcctgaactcgaccatgccgccgggccataacgccgagattgagcgt
cgcgccgtggccggcgatatcgatattctctatatagcgccagaacgactgacccaggcg
caaaccctaacgtggctggcccagctgcagatctcactgttcgccatcgatgaggcccat
tgcgtgtcgcaatggggccatgacttccgttccgactatctcaagctcagcctgctgcat
gaacgcttcccgaccattccgcgcatcgccctgaccgccaccgccgatgagcgcactcgg
gccgaaattatcgagcgcctgcaactgggcaatgcgcgcacctttatcagcagtttcgac
cgacccaatatcgattatcggatcagccaaaagctcaaacccaaggatcaactgctcgac
tttattcgccaagaacatgccgagcatgccggcatcgtctattgtttgtcgcgcaaaaag
gttgaagccacggcgctctggttgcagcagcagggctttaatgccctgccctaccatgcc
ggcctagatgcgacagtacggcaaacaaatcagcgccgctttctcaccgaagaggcggtg
attatcgtcgccaccatcgcctttggcatgggcatcgacaaacccgatgtgcgctttgtc
gcccacctggatctgcccaagagtgtcgaagcctattatcaggaaaccggccgagccgga
cgtgacggtcaggccgccaccgcctggatggtctatggccttgaggatgtgattaagctt
aagcagatgatggccggctcggacggcgatgaacagtttaaacggctggagcagcagaag
ttgaacgccatgctcggcttggccgagatcaccagctgccgacgccaggtgctgttgcgc
tactttggtgaccgactgcccgagccctgtggcaactgcgacaactgcctgagcccggta
gcaacctgggatggcaccgacgccagtcgcaaagcgctcagttgtgtctttcgcaccggt
cagcgctttggtgtgggccatctgatcgatgtgctgcgcggtaaaaataccgacaaagtg
cgccagtttcgccacgatcaggtctcgacctttgccatcggccaggatctcagcgacacc
caatggcggtcggtgtatcgccaattggtggcgcgcggtttgatcaatgtcttggatgaa
tacggccagctgcaattggctgaacccagtcgcgccctgctcaagggtgagagtcggatc
gagttgcgcctcgacaaggcgccaagcaaaaccacccgacccggtaagtcacgcaccagc
gtcgacattccggccgccgacagcgccctctgggatgcccttagagcgtgccgatcggcc
atcgctaaggcacagaaggtaccgccctatgtgatttttcacgatgccaccctgcaacag
atgctcagcgtccggcctcagtcgttggcggcactgggcagcatcgccggcattggtgac
aagaaacgcgaacagtatggcgcggcgtttctcgcggttctggccgacttcgcggcctag
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