Rhodoferax ferrireducens: Rfer_1350
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Entry
Rfer_1350 CDS
T00334
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rfer_1350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_1350
Enzymes [BR:
rfr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Rfer_1350
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rfer_1350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
ABD69084
UniProt:
Q21YR9
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All DBs
Position
1453415..1454065
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AA seq
216 aa
AA seq
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MSATSTTAAVAAAPAYWSDACKHLMKKDRVMKRLIPQFGDACLQTRGDAFVTLARSVVGQ
QISVKAAQTVWNRFALLPKKITAANVLKLKVDDMRAAGLSVRKVEYLVDLALHFDSGTVH
VETWETMDDEAIIAELIAIRGIGRWTAEMFLIFHLMRPNVLPLDDVGLINGISKNYFSGD
VVSRSDAREVAAAWAPYCSVATWYIWRSLDPLPVDY
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctaccagcactacagcggcagtggccgcggctcccgcctactggagcgacgcg
tgtaaacacctgatgaaaaaagaccgggtgatgaagcggctcattccgcagtttggcgac
gcctgcctgcaaacccggggcgatgcttttgtgacgctggcgcgcagcgtggtgggtcag
cagatttcggtcaaggcagctcaaaccgtatggaatcgttttgcgctgctgcccaagaag
atcacagcggccaacgtgctcaagctcaaagttgatgacatgcgcgccgcgggcttgagt
gtgcgcaaggtcgaatatctggtggacctggcgctgcactttgacagtggcacggtgcat
gtcgagacctgggagaccatggacgatgaggcgatcatcgccgagttgattgccattcgt
ggcattggccgttggacggctgagatgttcttgatctttcacctgatgcgccccaatgtg
ttgccgcttgacgacgtggggctgatcaatggcatcagcaagaactatttttcaggcgac
gtggtcagccgcagtgacgcccgcgaagtagccgccgcctgggcgccgtattgcagtgtt
gcaacttggtatatttggcgctcgctggatccactgccggtggactattga
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