Rhodoferax ferrireducens: Rfer_2376
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Entry
Rfer_2376 CDS
T00334
Name
(GenBank) valyl-tRNA synthetase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
rfr
Rhodoferax ferrireducens
Pathway
rfr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Rfer_2376
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
rfr01007
]
Rfer_2376
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rfr03016
]
Rfer_2376
Enzymes [BR:
rfr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
Rfer_2376
Amino acid related enzymes [BR:
rfr01007
]
Aminoacyl-tRNA synthetase
Class I (U)
Rfer_2376
Transfer RNA biogenesis [BR:
rfr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Rfer_2376
Prokaryotic type
Rfer_2376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
Val_tRNA-synt_C
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1b
Motif
Other DBs
NCBI-ProteinID:
ABD70093
UniProt:
Q21VW0
LinkDB
All DBs
Position
2615474..2618446
Genome browser
AA seq
990 aa
AA seq
DB search
MSRSLELASETAKDTMNDELQQPGLNSLSKSFEPAALEAHWGPEWERREYAHAGYRGKGV
PKDGAEAFAIQLPPPNVTGTLHMGHAFNQTIMDSLTRYHRMRGDNTVWIPGTDHAGIATQ
IVVERQLQDQKVSRHDLGRKNFVSKVWEWKEKSGNTITTQMRRMGDSVDWSREYFTMDPK
LSKTVTETFVQLYEQGLIYRGKRLVNWDPVLQSAVSDLEVESEEEDGFLWHILYPFADGP
QLVNGELAPGLVVATTRPETMLGDVAAMVHPDDERYQHLIGKHVTLPLCGRTIPVIADDY
VDKAFGTGVVKVTPAHDQNDYAVGQRHKLPMICVLTLDAKIDAVAPAAYVGMDRFVARKK
IVKDLEALGLLIEVKKHKLMVPRCARTGQIIEPMLTDQWFVAMSKVSPIDPTAKSIAQKA
IDAVQSGDVKFVPENWVNTYNQWMNNIQDWCISRQLWWGHQIPAWYDENGKVYVARNEAE
AQAQAPGKTLRRDEDVLDTWYSSALVPFSTMGWPEKTQDFDLYLPSSVLVTGYDIIFFWV
ARMIMMTTHFTGQVPFKHVYIHGLVRDAQGKKMSKSEGNVLDPVDLIDGIALPELLLKRS
EGLRKPETAPAVRKNTEKEFPAGIPAFGADALRFTFASLASLGRSINFDAKRCEGYRNFC
NKLWNASRFVLMNCEGQDCGLNEHTKEECAVGGAAHGYLEFSPADRWIVSLLQRAEAEVA
KGFEEYRLDNVASTIYDFVWNEFCDWYLEIAKVQIQQGKDNQDPQTGLAQQRATRRTLIR
TLETILRLAHPVIPFVTEELWQKVAPVAGRAGESVSIAVYPQAQPERIDEAALAHVGKLK
QLVDACRNLRGEMSVSPATRLPLFVIANQADEAAFLTQSAPVLKALAKLNEVRVFDDETA
WAAAAQAAPVAVVGEARICLFMAIDVAAEKTRLGKEAARLEGEIAKTEGKLSNEAFVARA
PAAVIEQERKRMTDFGATLAKIKDQLARLG
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgttcgctggaacttgccagcgaaacagccaaagacaccatgaacgacgaactg
caacaacccggcctcaacagcctgtccaaatcttttgagcccgccgccctggaagcccat
tggggaccggaatgggaacgccgggagtacgcgcacgccggctaccggggcaagggcgtg
ccgaaagacggcgccgaggccttcgccatccagctgccgccgcccaatgtcaccggcacg
ttgcacatggggcacgcgttcaaccaaaccatcatggactcgctgacgcgctaccaccgc
atgcgtggcgacaacacggtgtggattccgggcaccgaccatgccggcattgccacgcaa
atcgtggtggagcggcagttgcaggaccaaaaggtcagccgccacgacttgggacgaaaa
aatttcgtctccaaggtctgggaatggaaagaaaaatccggcaacaccatcaccacccaa
atgcgccgcatgggtgacagcgtggactggagccgcgaatacttcaccatggacccgaaa
ctgtccaaaaccgtgaccgagacctttgtccagctttatgagcaaggcttgatctaccgc
ggcaaacggctggtgaactgggacccggtgctgcaaagcgcggtcagcgatctggaagtg
gaaagcgaagaggaagacggctttctgtggcacatcctgtatcccttcgccgacggcccg
caattggtcaacggtgaactggcgcccggcctggtggttgccaccacgcgcccggaaacc
atgctcggtgacgtggcggcgatggtgcaccctgacgacgagcgctaccagcacctgatc
ggcaaacacgtcaccctgcccttgtgcggccgcaccattcccgtgattgccgacgactac
gtggacaaagccttcggcaccggcgtggtgaaggtcacgcccgcacatgaccagaacgat
tacgccgtgggccagcgccacaagctgccgatgatttgtgtgctgacactggatgccaag
attgacgcggtggcgccagccgcctacgtcggcatggatcgctttgtggcgcgcaagaaa
attgtcaaagacctggaagctttgggcttgctgattgaggtcaagaaacacaaactcatg
gtgccgcgctgcgcccgcaccggccagatcatcgaacccatgctgaccgaccaatggttt
gtcgccatgagcaaggtcagcccgattgaccctacggccaaatccatcgcccaaaaagcc
attgacgccgtgcagtccggcgacgtcaagttcgtgccggagaactgggtcaacacctac
aaccagtggatgaacaacatccaggactggtgcatcagccgccagctctggtggggtcat
cagattccagcctggtacgacgaaaacggcaaggtctacgtggcccgcaacgaggccgag
gcacaagcccaggccccgggtaaaaccctgcgccgtgacgaagacgtgctcgacacctgg
tactcctccgccctggtgccgttttccaccatgggctggccggaaaagacgcaagacttc
gacctctacctgccctcctccgtgctggtcaccggctacgacatcatcttcttctgggtc
gcccggatgatcatgatgaccacccatttcaccggccaggtgccgttcaaacacgtctac
atccacggcctggtgcgcgatgcgcaaggcaagaagatgagcaagtccgagggcaatgtg
ctcgacccggtcgacttgattgacggtattgcactgcccgaattgctgctcaaacgctcc
gaaggtctgcgcaagcccgaaacggcgcctgcggtgcgcaagaacaccgagaaagaattt
ccggccggcatcccggcctttggcgccgatgcgctgcgcttcacctttgcctcgctggcc
tcgctgggccgcagcatcaatttcgatgccaagcgctgcgagggctaccgcaatttctgc
aacaagctgtggaacgccagccgttttgtgctgatgaactgcgaaggccaggattgcggc
ctgaacgagcacacgaaagaagaatgcgccgtcggcggtgctgcgcacggctacctggag
ttcagcccggccgatcgctggatcgtctcgctactgcagcgcgccgaagccgaggtcgcc
aaaggttttgaagaataccggctggacaacgtcgccagcaccatttacgactttgtctgg
aacgagttctgcgactggtatctggaaatcgccaaggtgcagattcaacaaggcaaagac
aaccaggacccgcagacgggtctggcgcaacagcgtgccacgcgccgcaccctgattcgc
actttggaaaccatcctgcgcctggcgcaccccgtgattccctttgtgaccgaggagcta
tggcaaaaagtggcaccggtcgccggccgggccggcgaatcggtgtcgatcgcggtttac
cctcaggcacagcccgagcgcattgatgaagcggcgctggcgcatgtgggcaaactcaaa
caacttgtcgatgcctgccgcaatctgcgcggtgagatgagcgtgtcacccgccacccgg
ctacccttgttcgtgatcgccaaccaggcagatgaagccgcctttttgacgcaatcggcg
ccggtcctcaaggcgctggccaagctgaacgaggttcgcgtgtttgacgacgaaaccgcc
tgggccgccgccgctcaagccgcgcccgtggctgtggtgggtgaggcacgcatttgcctg
ttcatggccattgacgtcgccgccgaaaagacccgtctgggtaaggaggcagcgcgtctg
gaaggtgaaattgccaagaccgaaggcaagttgagcaacgaggcgttcgtcgcccgcgcc
ccggccgccgtcatcgaacaagaacgcaagcgcatgactgattttggtgcgactctggcc
aaaataaaagaccaactcgcgcgcctgggctag
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