Rhodoferax ferrireducens: Rfer_3075
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Entry
Rfer_3075 CDS
T00334
Name
(GenBank) T/G mismatch-specific endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rfr03400
]
Rfer_3075
DNA repair and recombination proteins [BR:
rfr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
Rfer_3075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
Motif
Other DBs
NCBI-ProteinID:
ABD70785
UniProt:
Q21TW8
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All DBs
Position
3403830..3404288
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AA seq
152 aa
AA seq
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MADVVSPTVRSRMMSGIKGKNTQPEILVRRMLFASGYRFRLHRRDLPGTPDIVMPGRKIA
IFVHGCFWHFHRGCRFAKMPVTRADFWKAKLEANMERDRRAVERLQGLGWRVLCVWECST
RDAKATVSLQGTLCEWIESDARLGEIGAPSRS
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgtcgtctcccccactgtccgtagccggatgatgtccggcatcaaaggcaag
aacacccagcctgagattctggttagacgtatgctgttcgcctcaggctacagatttcga
cttcatcgccgtgatttgcccggcacgccggacatcgtcatgccgggccgcaagatcgcc
atcttcgtccacggctgtttctggcattttcaccgtgggtgccgattcgccaaaatgccc
gtcactcgcgccgacttctggaaggccaaacttgaggccaacatggagcgagaccgccgc
gcagtcgagaggctccaaggtttgggctggcgagtgctgtgcgtctgggaatgctctacg
cgtgacgctaaggccactgtcagtctccaaggcactttgtgcgaatggatcgagagcgat
gcacggctcggtgaaataggcgccccatcgcgaagctga
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