Rhodoferax ferrireducens: Rfer_3508
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Entry
Rfer_3508 CDS
T00334
Name
(GenBank) transcriptional regulator, TetR family
KO
K22108
TetR/AcrR family transcriptional regulator, cholesterol catabolism regulator
Organism
rfr
Rhodoferax ferrireducens
Brite
KEGG Orthology (KO) [BR:
rfr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rfr03000
]
Rfer_3508
Transcription factors [BR:
rfr03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
Rfer_3508
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_24
AT_hook
Esterase_PHB
TetR_C_29
Motif
Other DBs
NCBI-ProteinID:
ABD71213
UniProt:
Q21SP0
LinkDB
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Position
complement(3899720..3900403)
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AA seq
227 aa
AA seq
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MTVPASPINHESGLLAHPAPKRARGRPRKTEDERDDGNRRHQLLTAAARLFRDKGFDATS
TRDIAAAVGMHSGSPFYHFKSKDALLLAVMEEGMRSALARQADALHGPASASAASGPLVQ
IRRLIRAHFDTLLGPGNDFIPVMLYEHRSLNARQRASLAMLQVAYESAWTPVLEALHASG
HLRAPVKLSRLLILGALNWSVQWFDEKKGASLDELADAAMALFLKES
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgactgttccagcctcacccattaatcacgaatccgggctgctggcccaccctgccccc
aagcgcgctcgcgggcgcccgcgcaagaccgaggacgagcgcgacgacgggaaccggcgg
catcaattgctcaccgcagccgcccggctgtttcgtgacaaaggctttgatgccaccagc
acgcgcgacatcgcagctgccgtcggcatgcacagcggctcgcctttttatcacttcaaa
agcaaggatgcgctgctgctggcggtgatggaggagggcatgcgctcggccctggcgcgc
caggccgatgcactgcatggtccagcgtcagcgtcagcggcaagtggacccctggtgcag
atccggcgcctgatccgggcccacttcgacacattgctggggccgggcaacgatttcatc
cctgtgatgctgtatgaacatcggtccttgaatgcgcgccagcgtgcgtcgctggccatg
ctgcaagtggcctacgaatcagcctggacgccggtgctcgaagccctgcacgcgagtggc
catttgcgtgccccggtgaagctctcaaggttgttgattctgggcgcgctgaactggtcg
gtgcagtggttcgatgaaaaaaaaggcgcgtcgctggatgaattggccgatgccgccatg
gctttgtttttgaaggaatcctga
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