Rhodoferax ferrireducens: Rfer_3548
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Entry
Rfer_3548 CDS
T00334
Name
(GenBank) PAS/PAC sensor hybrid histidine kinase
Organism
rfr
Rhodoferax ferrireducens
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
HATPase_c
Response_reg
PAS_8
HisKA
PAS_3
PAS_10
HATPase_c_2
PAS_7
AcaB
Motif
Other DBs
NCBI-ProteinID:
ABD71253
UniProt:
Q21SK0
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Position
complement(3945242..3948265)
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AA seq
1007 aa
AA seq
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MLKTDPIPDLPKAVAGTPEGLTEFRRQEALLKTGALQNAILNSANFSSIATDERGVIQIF
NIGAERMLGYAAADVLNKITPADISDPQELILRATELSAELETAIAPGFEALVFKASRGI
EDIYELTYIRKDGSRFPAIVSVTALRNARGTVIGYLLIGTDNTARKQVEAERQHLLKEQE
WTNQQLHQANLTLRESEEKFAVTLHSIGDAVIATDAAARVTLLNPLAERLTGWTQAQASG
RPVDEIFTIINKETRLSATVPVAETLAHGTIQGLANHTVVIARDGSECDIADSCAPIRDR
DGQVIGAVLVFRDVTEEYAAQQALRDSTALIQTILNTVADGIITIYARGGMIKTVNPAAE
RMFGYSGIELVGQNFSLLIPELDQDQRNGSLEYYSASDEARAAGLGREVLGRRQDGSVFP
MEMAVSEMWLGGERYFTGILRDTTARKQAEEALLQAGALQSAIFNSANFSSIATDAKGVI
QIFNVGAERMLGYTAAEVMNKVTPADISDSKEVIARAKALSLELGTQIEPGFEALVFKAS
RGIEDIYELTYIRKDGSRFPAVVSVTALRDAQGVIIGYLLIGTDNTARKRVEAERAVLDR
ALRDKNVELESARQAADKANLAKSEFLSSMSHELRSPLNAILGFAQLMESGVPPPTATQK
ASIDQILHGGWYLLELINEILDLALIESGKLSLSMEPIALPDVLLDCQAMIEPQAQKSDI
RISFPQFNAPCFVNADRTRVKQVIVNLMSNAIKYNRVGGTVEVTCKKVAAQRLRISVRDS
GEGLSAEKVTQLFQPFNRLGQEVGSEEGTGIGLVVSKRLVELMGGEIGAQSIVGTGSVFW
FELNLVAAPQFAADSDAPLVPAQPPTAPGAALRTLLYVEDNRANMELVKQLIARRPDMRL
LSATDGMQGITLARIHLPKVILMDINLPGISGLQALKILREDPATRHIPVVAISANAMPR
DIEKGLQAGFLRYLTKPIKVNEFMEVLDMALETARTGLDNAAMEESM
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgttaaaaactgaccctatccctgacttgcccaaggctgtcgcaggcacgccggagggt
ctgaccgagttcaggcgacaggaggccttgctcaaaaccggggccttgcagaacgcgatt
ctcaatagcgccaatttttcgagtattgccaccgatgaacggggcgttattcagattttc
aatattggcgccgagcgcatgctgggctatgccgccgccgatgtcctgaacaagatcacg
cccgccgatatctccgatccgcaggaattgatcttgcgtgccaccgaactgagcgctgag
cttgaaaccgccattgcgccgggtttcgaggccctggtgttcaaagcctcgcgcggtatt
gaagacatttacgagctgacctacatccgcaaagacggcagccgttttccggccatcgtg
tcggtcaccgccttgcgcaatgcgcgcggcaccgtcatcggttacctcctgatcggcacc
gacaacaccgcgcgcaagcaggttgaagcagagcgtcagcacctgctgaaggagcaggag
tggaccaatcagcaactgcatcaggccaacctgactttgcgggagagcgaggaaaaattc
gccgtgacgctgcattccattggggatgccgtgattgccaccgacgccgctgcgcgcgtg
acgctgctcaatcccctggccgagcggctcaccggctggacacaagcgcaggccagcggt
cgcccggtggacgagattttcacaatcatcaacaaggaaacccggctcagcgccaccgtt
cccgtggcggaaaccctggcgcacggcacgattcagggcctggccaatcacacggttgtg
attgcacgcgatggcagcgagtgcgatattgccgacagttgcgcaccgattcgcgaccgc
gacggacaggtgatcggtgccgtgctcgtgtttcgtgacgtcaccgaggaatatgcggcc
cagcaggccctgcgcgacagcacggccctgatccagaccattctcaataccgtggcggat
ggcatcatcaccatttatgcccgcggcggcatgatcaagaccgtgaatccggccgctgag
cgcatgtttggctatagcgggatcgagctggtcgggcagaacttcagcctgctgattccc
gaattggaccaggatcagcgcaatggctcacttgagtactacagtgccagtgacgaggcg
cgtgcggccggcttggggcgcgaggtgctgggccggcgccaggatggcagtgttttcccg
atggagatggccgtcagcgagatgtggttgggcggcgagcgctatttcaccggcattttg
cgcgataccaccgcgcgcaaacaggccgaagaagcgctgcttcaggcgggggccttgcag
agcgcgattttcaacagcgccaatttttccagcattgccactgacgccaagggcgtcatt
cagattttcaacgtcggcgccgagcgcatgctgggttacacggcggcagaggtgatgaac
aaggtcaccccggccgacatttccgattcgaaagaagtgattgcgcgggccaaggcactc
agtctcgaactcgggacccagattgagccgggcttcgaagcgctggtgttcaaggcctcg
cgcggcattgaggacatctacgagctgacctacatccgcaaagacggcagccgcttcccg
gcggtggtgtcggtcacggcgctgcgcgacgcgcagggcgtcatcattggttacctgttg
atcggtaccgacaacacggcgcgcaagcgcgtcgaagccgagcgggcggtgctcgatcgg
gcgctgcgggacaagaatgtcgaactcgagagcgcccggcaagccgccgacaaggccaat
ctcgccaaatcagagtttctgtcgagcatgagccacgagttgcgctctccgctcaatgcg
atcctgggctttgcgcaactgatggagtcgggtgtgccgccgcccacggccacgcaaaag
gccagcatcgaccagattcttcatggcggctggtatctgctggagttgatcaacgagatt
ctcgatctggccttgatcgagtccggcaagctgtcgctgtcgatggagccgatcgcgctg
ccggacgtgttgcttgactgtcaagccatgatcgaaccgcaggcacaaaagagcgacatt
cgcatcagctttccgcagttcaacgccccttgctttgtgaatgccgaccggacgcgtgtc
aagcaggtgatcgtgaacctgatgtccaacgccatcaagtacaaccgcgtgggcggtacg
gtcgaagtgacgtgcaagaaggtcgccgcgcaacgcctgcggatcagtgtgcgcgattcg
ggcgaaggactctcggcagagaaagtgacccaactgtttcagccgttcaatcggctcggg
caagaggttggttccgaagagggtaccggcatcggcctggtggtgagcaagcggctggtc
gaattgatggggggcgaaattggcgcgcaaagtatcgtcgggaccggcagcgtgttctgg
tttgagttgaatttggtggcggcaccgcaatttgccgccgattccgatgccccgctggtg
ccggcgcagccgcccaccgcgcctggcgccgcgctgcgcacgctgctgtacgtggaagac
aaccgggccaacatggagttggtcaagcagcttattgcgcgacgtccggatatgcgcctg
ttgagtgccacggatggcatgcaaggtattacgctggcgcgcattcatctgcccaaagtg
attctgatggacatcaatctgccgggcatcagcggccttcaggcgctgaaaatcctgcgt
gaagaccctgcaacccggcacattccggtggtggccatcagtgccaatgcgatgcctcgc
gacattgagaaaggcctgcaggccgggttcttgcgctacctgaccaagccgatcaaagtc
aacgagttcatggaagtgctggatatggcgctggaaacggcgcggaccggattggacaac
gccgcaatggaagaatccatgtga
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