KEGG   Rhizobium gallicum: RGR602_CH02491Help
Entry
RGR602_CH02491    CDS       T03539                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rga  Rhizobium gallicum
Pathway
rga00473  D-Alanine metabolism
rga00550  Peptidoglycan biosynthesis
rga01100  Metabolic pathways
rga01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rga00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    RGR602_CH02491 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RGR602_CH02491 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RGR602_CH02491 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rga01011]
    RGR602_CH02491 (ddl)
Enzymes [BR:rga01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RGR602_CH02491 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:rga01011]
 Precursor biosynthesis
  Amino acid ligase
   RGR602_CH02491 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 GARS_A ATP-grasp_3 ATP-grasp CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID: AJD41816
UniProt: A0A0B4X3V4
LinkDB All DBs
Position
complement(2469892..2470818)
Genome map
AA seq 308 aa AA seqDB search
MSRKHVAVLMGGFSSERPVSLSSGTACADALEGEGFQVARIDVDRDISAKLAALRPDVAF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKGKAKGVAAAAGVPVAQSEVINR
FAFPAEHPMKPPYVVKPVREGSSFGVVIVQEDQAHPPQIISSPEWRYGEEVIVERYVYGR
ELTCGVMGDKALGVTEVVPQGHNFYDYDAKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEVIWLEVNTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCSR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggagcggccggtgagc
ctgtcttcgggaacggcttgcgcggatgctctcgagggcgagggcttccaggttgcgcgg
atcgatgtcgatcgggatatttccgcaaaactggcggcgcttcgtcccgatgtcgccttc
aatgcgctgcatggccccttcggcgaggatggcaccatccagggcatcctcgaatatctc
gaaattccctacacgcattccggcgttcttgcctctgcccttgcgatggacaagggcaag
gccaagggggttgcagcggcggccggcgtccctgtggcgcaatcggaagtcatcaatcgc
ttcgcctttccggccgaacatccaatgaagccgccctatgtcgtgaagccggtccgggag
ggctccagcttcggtgtcgtcatcgttcaggaggatcaggcccatccgccgcagatcatc
agttcgccggagtggcgctatggcgaggaggtcatcgtcgagcggtatgtctatggccgc
gaactgacatgcggtgtcatgggcgacaaggctctcggtgtgaccgaagtggtgccgcag
ggtcacaacttctatgactatgatgccaagtatgctgcgggcggctcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggcgttaagggcgcat
caagcaattggttgtcgtggggtcagtcggtccgacttccgttacgacgaccggttctcc
gaagatggtgaagttatctggctggaagtaaacacccagccgggcatgacgccaacctcc
cttgtgcccgaaatggccggtcatgccggttattcctttggtgaattcttgcgttggatg
gtggaggacgcctcttgttctcgttga

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