Rhizobium gallicum bv. gallicum: RGR602_CH02748
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Entry
RGR602_CH02748 CDS
T03539
Name
(GenBank) RNA polymerase sigma factor protein
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rga
Rhizobium gallicum bv. gallicum
Brite
KEGG Orthology (KO) [BR:
rga00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rga03021
]
RGR602_CH02748
Transcription machinery [BR:
rga03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RGR602_CH02748
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF6596
Sigma70_r2
Sigma70_r4_2
TPR_2
TPR_21
TPR_8
TPR_1
TPR_14
TPR_12
TPR_9
Sigma70_ECF
Motif
Other DBs
NCBI-ProteinID:
AJD42068
UniProt:
A0A0B4X6A2
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Position
complement(2731876..2733135)
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AA seq
419 aa
AA seq
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MTDIAWIDVALTAARPKALGALLRYFRNLDIAEEAFQEACLRAIRTWPEKGPPRDPTAWL
IFVGRNSGIDAVRKQAKTQALPDEDLISDKEDAESDIADRLDESNYRDDILRLLFICCHP
DLPATQQIALALRIVSGLSVPQIARAFLVGESAMEQRITRAKARVAKAGVPFETPGPEER
AERLSIVSTMIYLIFNEGYSQGDPKREAAAFSDEAIRLGRLLLRIFPGEPEIMGLLALML
LQISRRDARFEANGELVLLEDQDRSRWNHALINEALNLLDKAIRHRRPGPYQLQAAIAAI
HSRAKRAEDTDWEEIDLLYRVLERLQPSPVVTLNRAVAISKLKGPEEALRLVETLGEKLD
GYFYFHGLRGGLLKQMGRAREAREAFDRAIALANSAAEAAHIRLQIDKLQSEPAHPVAK
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgacggatatcgcctggatcgacgttgcgctgactgctgcccggccgaaggcgctgggc
gcgctgctgcgttacttccgcaatctcgacattgcggaagaagcgtttcaggaggcgtgt
ctgcgggcaatccgcacttggccggaaaaaggcccgccgcgcgatccgaccgcatggctg
atcttcgtcggccgcaacagcggtatcgacgcagtgcgcaaacaggcaaagacccaggcg
ttgccggacgaagacttgatctccgacaaggaggatgccgaaagcgatattgccgaccgg
ctggacgaatccaactatcgcgacgatatcctgcggctgctcttcatctgctgtcatccc
gacctgcctgccacccagcagatcgcgctggcattgcgcatcgtttccgggctctctgtg
ccgcagatcgcgcgcgcctttctcgtcggcgaaagtgccatggagcagcggattacccgc
gccaaggcacgcgttgcgaaagccggcgtgccgttcgagacgccgggtcccgaggagcgg
gcggagcgtctttcgatcgtctcgacgatgatctacctgatcttcaacgagggctattcg
cagggcgatccgaaacgcgaggcggccgccttcagcgatgaggcgatccggctcggccgc
ctcctgcttcgcatctttccgggcgagccggagatcatggggctcttggcgctgatgctg
ctgcagatctcgcggcgcgacgcgcgcttcgaggcaaatggcgaactggtactgctcgaa
gatcaggaccgctcgcgttggaatcatgctttgatcaacgaagcgctgaatctgctcgac
aaggcgatccgccaccgccggcccggaccctatcagttgcaggcggcaattgcggctatt
cattcccgggcgaagcgagccgaagacacggactgggaagagatcgatctgctctaccgc
gtgctcgagcgccttcagccgtccccggtcgtcacgctcaaccgggcggttgcgatttcg
aagcttaagggaccggaggaggccttgcggcttgtcgaaacgctcggtgaaaagctcgac
ggctatttctactttcatggcctgcgcggcggcctgctgaagcagatgggccgggcgagg
gaggcgcgcgaagccttcgaccgcgcgatcgcgcttgcaaattcagctgccgaagcggct
cacatccgcctgcagatcgacaagctgcagagcgagccggcacatccggttgcgaaataa
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