Rubrivivax gelatinosus: RGE_00020
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Entry
RGE_00020 CDS
T01803
Symbol
dnaN
Name
(GenBank) DNA polymerase III beta subunit DnaN
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge03030
DNA replication
rge03430
Mismatch repair
rge03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGE_00020 (dnaN)
03430 Mismatch repair
RGE_00020 (dnaN)
03440 Homologous recombination
RGE_00020 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rge03032
]
RGE_00020 (dnaN)
03400 DNA repair and recombination proteins [BR:
rge03400
]
RGE_00020 (dnaN)
Enzymes [BR:
rge01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGE_00020 (dnaN)
DNA replication proteins [BR:
rge03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGE_00020 (dnaN)
DNA repair and recombination proteins [BR:
rge03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGE_00020 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta_2
DNA_pol3_beta
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BAL93347
UniProt:
I0HK10
LinkDB
All DBs
Position
1674..2783
Genome browser
AA seq
369 aa
AA seq
DB search
MIVLKAAQEKLLEALQSVAGIVERRHTLPILANVLLRKNGPVVELTTSDLEIQVRTSAEL
GGDEGHFATTVGARKLIDILRALPSEQVVTLSSAQNKLTLAGGKSRFTLQSLPADDFPLV
NEAVDFGPAFSVPQKTLRQLINQVHFAMAVHDIRYYLNGILFIAEGKTLTLVATDGHRLA
LAQGTLETDVPNRQEVILPRKTVLELQRLLKDEETPIEMRFAGNQAKFAFSGLEFVTKLV
EGKFPDYNRVIPRNHKNALVVGRAALLGSLQRAAILTSEKFKGVRLNLEPGVLRIASSNA
EQEEAKEELEIDYAGDAIEIGFNVTYLIDVLANMQQEMVKIELQDTNASALFTVPEQTGF
KYVVMPMRI
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgattgttctgaaggccgcccaggaaaagttgctcgaggccctccagtcggtggccggc
atcgtcgagcggcggcacacgctgcccatcctggccaacgtcctgttgcgcaagaacggc
ccggtcgtcgagctgacgaccagcgacctggagatccaggtgcgcaccagcgccgagctc
ggcggcgacgaaggtcacttcgcgacgacggtgggcgcgcgcaagctgatcgacatcctg
cgggcgctgccttcggagcaggtggtgacgctgtcgtcggcgcagaacaagctgacgctg
gccggcggcaagagccgcttcacgctgcagtcgctgccggccgacgacttcccgctggtc
aacgaggcggtcgacttcggcccggccttcagcgtgccgcagaagacgctgcgccagctg
atcaaccaggtgcacttcgcgatggcggtgcacgacatccgctactacctcaacggcatc
ctgttcatcgccgaaggcaagacgctgacgctggtggccaccgacggccaccgcctggcg
ctggcccagggcacgctggaaaccgacgtgcccaaccgccaggaagtcatcctgccgcgc
aagacggtgctcgagctgcagcgcctgctcaaggacgaggaaacgccgatcgagatgcgc
ttcgccggcaaccaggccaagttcgcgttctcggggctggagttcgtcaccaagctcgtc
gagggcaagttccccgactacaaccgcgtcatcccgcgcaaccacaagaacgcgctcgtc
gtcggccgcgccgcgctgctgggcagcctgcagcgtgcggccatcctgaccagcgagaag
ttcaagggcgtgcgcctgaacctcgagcccggcgtgctgcgcatcgcgtcgtccaacgcc
gagcaggaagaggccaaggaagagctcgagatcgactacgccggcgacgcgatcgagatc
ggcttcaacgtcacctacctcatcgacgtgctggccaacatgcagcaggagatggtgaag
atcgagctgcaggacaccaatgccagcgcgctgttcaccgtgccggagcagaccggcttc
aagtacgtcgtgatgccgatgcgcatctga
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