Rubrivivax gelatinosus: RGE_02540
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Entry
RGE_02540 CDS
T01803
Symbol
metH
Name
(GenBank) cobalamin-dependent methionine synthase MetH
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00270
Cysteine and methionine metabolism
rge00450
Selenocompound metabolism
rge00670
One carbon pool by folate
rge01100
Metabolic pathways
rge01110
Biosynthesis of secondary metabolites
rge01230
Biosynthesis of amino acids
rge04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
RGE_02540 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
RGE_02540 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RGE_02540 (metH)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
RGE_02540 (metH)
Enzymes [BR:
rge01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
RGE_02540 (metH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
Pterin_bind
B12-binding_2
B12-binding
Motif
Other DBs
NCBI-ProteinID:
BAL93599
UniProt:
I0HKR2
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All DBs
Position
complement(264149..266872)
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AA seq
907 aa
AA seq
DB search
MTAALPAMRLSGLEPVSIGDGTLFVNIGERTNVTGSRAFARMILEGRFEDALSVARQQVE
NGAQVIDVNMDEAMLDSAAAMDRFLKLLATEPEIARVPVMVDSSKWSVIETGLKCLQGKG
IVNSISLKEGEAEFKRQAKLVRRYGAAAVVMAFDEQGQADTYRRKTEICARAYRILVDEV
GFPPEDIVFDPNVFAIATGIEEHANYAVDFIEATRWIKQNLPGAKVSGGISNVSFSFRGN
DPVREAIHTVFLYHAIKAGLDMGIVNAGMVGVYDDLDAELRERVEDVVLNRRADAAERLI
EIAERAKGAARDDSARLAWRAGTVEERLAHALVHGITEFIAADTEEAWQTVRAKGGRPLH
VIEGPLMAGMNTVGDLFGQGKMFLPQVVKSARVMKQAVAQLLPYIEAEKLALQDAGGDVK
PKGKVIIATVKGDVHDIGKNIVTVVLQCNNFEVVNMGVMVPCQDILEKARVEGADIVGLS
GLITPSLEEMQHVAAEMQRDAWFRERGTPLLIGGATCSRVHTAVKIAPHYDGPVIYVPDA
SRSVGVCSDLLSEERQAAYLAELRADYEHVRRLHASKKATPLVTLAAARANRARPDWAAY
EPPAPRAPGRRLFRHYDLAELARFIDWGPFFQTWDLAGPYPAILDDEIVGEAARRVFADG
QRMLERLVEGRWLQANGVVALLPANTVDEDTIEVYTDDSRSQVAMRWTPLRQQGERPVID
GVPRPNRSLADFVAPRGVKPDWIGMFAVTAGLGCDERAQRFAEAHDDYSSIMVKALADRL
AEAFAERLHQRVRTELWGYAADEALAVDELIGERYRGIRPAPGYPACPDHGPKRAMFELL
KATEIGMGLTENLAMTPAASVSGFYLAHPEACYFNVGPVGDDQVADFAAREGISREDAER
RLATQRR
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctgccctgcccgcgatgcgcctgtcgggcctcgaacccgtctcgatcggcgac
ggaacgctgttcgtcaacatcggcgagcgcaccaacgtcaccggctcgcgcgccttcgcc
cgcatgatcctcgagggccgcttcgaggacgcgctgtcggtcgcgcgccagcaggtcgag
aacggcgcccaggtcatcgacgtcaacatggacgaggcgatgctcgactcggccgcggcg
atggaccgtttcctgaagctgctggccaccgagcccgagatcgcgcgcgtgccggtgatg
gtcgacagctccaagtggagcgtcatcgagaccgggctcaagtgcctgcagggcaagggc
atcgtcaactcgatctcgctgaaggagggcgaggccgagttcaagcgccaggcgaagctg
gtgcgccgctacggcgccgcggccgtcgtcatggccttcgacgagcagggccaggccgac
acctaccggcgcaagaccgagatctgcgcgcgcgcctaccgcatcctcgtcgacgaggtc
ggtttcccgcccgaggacatcgtcttcgaccccaacgtcttcgcgatcgccaccggcatc
gaggagcacgccaactacgccgtcgacttcatcgaggcgacgcgctggatcaagcagaac
ctgcccggcgccaaggtctcgggaggcatcagcaacgtctcgttcagcttccgcggcaac
gacccggtgcgcgaggcgatccacaccgtcttcctctatcacgcgatcaaggccggcctg
gacatgggcatcgtcaacgccggcatggtcggcgtctacgacgacctggacgccgagctg
cgcgagcgtgtcgaggacgtggtgctgaaccgccgcgccgacgccgccgagcgcctgatc
gagatcgccgaacgcgccaagggcgcggcgcgcgacgactcggcgcgcctggcctggcgc
gccggcacggtggaggaacgcctggcgcacgcgctggtgcacggcatcaccgagttcatc
gccgccgacaccgaagaggcctggcagacggtgcgcgccaagggcgggcgcccgctgcac
gtcatcgaaggcccgctgatggccggcatgaacaccgtcggcgacctcttcggccagggc
aagatgttcctgccgcaggtggtcaagagcgcgcgcgtgatgaagcaggcggtggcccag
ctgctgccttacatcgaggccgagaagctggcgctgcaggacgccggcggcgacgtcaaa
cccaagggcaaggtgatcatcgccaccgtcaagggcgacgtgcacgacatcggcaagaac
atcgtcaccgtcgtcctgcagtgcaacaacttcgaggtcgtcaacatgggcgtgatggtc
ccgtgccaggacatcctcgagaaggcgcgtgtcgaaggcgccgacatcgtcggcctgtcg
ggcctcatcacgcccagcctggaggagatgcagcacgtcgccgccgagatgcagcgcgac
gcatggttccgcgagcgcggcacgccgctcttgatcggcggcgccacctgcagccgcgtg
cacaccgcggtgaagatcgcgccgcactacgacggcccggtgatctacgtgcccgacgcc
tcgcgcagcgtcggcgtctgctcggacctgctgtccgaggagcgccaggcggcctacctc
gccgagctgcgcgccgactacgagcacgtgcgccggctgcatgccagcaagaaggcgacg
ccgctggtgacgctggccgccgcgcgcgccaaccgcgcccgccccgactgggcggcctac
gagccgccggcgccgcgtgcgcccggccggcgcctgttccgccactacgacctggcggag
ctcgcgcgcttcatcgactggggcccgttcttccagacctgggacctcgccggcccctac
ccggcgatcctcgacgacgagatcgtcggcgaggccgcacgccgcgtcttcgccgacggc
cagcgcatgctggagcgcctggtcgaaggccgctggctgcaggccaacggcgtcgtcgcg
ctgctgccggccaacacggtggacgaggacacgatcgaggtctacaccgacgacagccgc
agccaggtcgcgatgcgctggacgccgctgcgccagcagggcgagcgcccggtgatcgac
ggcgtgccgcggcccaaccgcagcctcgccgacttcgtcgcgccgcgcggggtcaaaccc
gactggatcgggatgttcgccgtcaccgccggcctgggctgtgacgaacgcgcgcagcgt
ttcgccgaagcccacgacgactactcgtccatcatggtcaaggccctggccgaccgcctg
gccgaagccttcgccgagcgcctgcaccagcgcgtgcgcaccgaactctggggctacgcc
gccgacgaggcgctggccgtcgacgagctgatcggcgaacgctaccgaggcatccgcccg
gcgccgggttacccggcctgccccgaccacggccccaagcgcgcgatgttcgagctcttg
aaggccacggagatcggcatgggcctgaccgagaacctggcgatgacgccggcagccagc
gtcagcggcttctatctcgcgcacccggaagcctgctacttcaacgtcggcccggtcggc
gacgaccaggtcgccgacttcgccgcgcgcgagggcatcagccgggaagacgccgagcgc
cggctggcgacgcagcgccgctga
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