KEGG   Rubrivivax gelatinosus: RGE_09560
Entry
RGE_09560         CDS       T01803                                 
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase Ddl
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge00470  D-Amino acid metabolism
rge00550  Peptidoglycan biosynthesis
rge01100  Metabolic pathways
rge01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rge00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    RGE_09560 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    RGE_09560 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    RGE_09560 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rge01011]
    RGE_09560 (ddl)
Enzymes [BR:rge01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     RGE_09560 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:rge01011]
 Precursor biosynthesis
  Amino acid ligase
   RGE_09560 (ddl)
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_3 ATP-grasp_4 CPSase_L_D2 GARS_A TTL ATP-grasp
Other DBs
NCBI-ProteinID: BAL94297
UniProt: I0HMR0
LinkDB
Position
994926..995876
AA seq 316 aa
MNHLGKVAVLMGGSSAERQVSLMSGNGVLEALRRAGVDAQPFDPAERELAELKHAGFERA
FIALHGRHGEDGTVQGALELLRIPYTGSGVMASAIAMDKVMTKRIWAAEGLPTPRWAWLS
PEHQAREDVVAVPDKLGLPLIVKPPREGSSIGITKVAGYSEMQDAVKLASEYDADVLCEE
FIDGIEVTCAVLGEGASARALPVIRIVAPGGNYDFEHKYFSEETGYHCPSGLPPAEEAEI
QRLTLAAYRLLGCRGWGRADLMIRESDRKPFLLEMNTSPGMTSHSLVPLAARVAGMSYEQ
LCVHVLECAALDHPGV
NT seq 951 nt   +upstreamnt  +downstreamnt
atgaatcacctgggcaaggtcgccgtcctgatgggcggatccagcgccgagcggcaggtg
tcgctgatgtcgggcaacggcgtgctcgaggcgctgcgccgcgccggcgtcgacgcgcaa
ccgttcgacccggccgaacgcgagctggccgaactcaagcacgccggcttcgaacgcgcc
ttcatcgcgctgcacggccgccacggcgaggacggcacggtgcagggcgcgctggagctg
ctgcgcatcccctataccggctcgggcgtgatggccagcgcgatcgcgatggacaaggtc
atgaccaagcgcatctgggccgccgaagggctgccgacgccgcgctgggcctggctgtcg
ccggagcaccaggcgcgcgaggacgtcgtcgccgtgcccgacaagctgggcctgccgctg
atcgtcaagccgccgcgcgagggctcgtcgatcggcatcaccaaggtcgccggctactcc
gagatgcaggacgcggtgaagctggcctccgagtacgacgccgacgtgctctgcgaggag
ttcatcgacggcatcgaggtcacctgcgcggtgctcggcgaaggcgcctcggcgcgcgcg
ctgccggtgatccgcatcgtcgcgcccggcggcaactacgacttcgagcacaagtacttc
tccgaggagaccggctaccactgcccgagcggcctgccgccggccgaggaggccgagatc
cagcgcctgacgctggccgcctaccgcctgctcggctgccgcggctggggccgcgccgac
ttgatgatccgcgagagcgaccgcaagcccttcctgctggagatgaacaccagcccgggc
atgacgagccactcgctggtgccgctggccgcgcgcgtggccggcatgagctacgaacag
ctgtgcgtgcacgtgctcgagtgcgccgcgctggaccacccgggagtctga

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