Rubrivivax gelatinosus: RGE_09560
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Entry
RGE_09560 CDS
T01803
Symbol
ddl
Name
(GenBank) D-alanine--D-alanine ligase Ddl
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rge
Rubrivivax gelatinosus
Pathway
rge00470
D-Amino acid metabolism
rge00550
Peptidoglycan biosynthesis
rge01100
Metabolic pathways
rge01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rge00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RGE_09560 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGE_09560 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RGE_09560 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
RGE_09560 (ddl)
Enzymes [BR:
rge01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
RGE_09560 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rge01011
]
Precursor biosynthesis
Amino acid ligase
RGE_09560 (ddl)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
GARS_A
TTL
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
BAL94297
UniProt:
I0HMR0
LinkDB
All DBs
Position
994926..995876
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AA seq
316 aa
AA seq
DB search
MNHLGKVAVLMGGSSAERQVSLMSGNGVLEALRRAGVDAQPFDPAERELAELKHAGFERA
FIALHGRHGEDGTVQGALELLRIPYTGSGVMASAIAMDKVMTKRIWAAEGLPTPRWAWLS
PEHQAREDVVAVPDKLGLPLIVKPPREGSSIGITKVAGYSEMQDAVKLASEYDADVLCEE
FIDGIEVTCAVLGEGASARALPVIRIVAPGGNYDFEHKYFSEETGYHCPSGLPPAEEAEI
QRLTLAAYRLLGCRGWGRADLMIRESDRKPFLLEMNTSPGMTSHSLVPLAARVAGMSYEQ
LCVHVLECAALDHPGV
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacctgggcaaggtcgccgtcctgatgggcggatccagcgccgagcggcaggtg
tcgctgatgtcgggcaacggcgtgctcgaggcgctgcgccgcgccggcgtcgacgcgcaa
ccgttcgacccggccgaacgcgagctggccgaactcaagcacgccggcttcgaacgcgcc
ttcatcgcgctgcacggccgccacggcgaggacggcacggtgcagggcgcgctggagctg
ctgcgcatcccctataccggctcgggcgtgatggccagcgcgatcgcgatggacaaggtc
atgaccaagcgcatctgggccgccgaagggctgccgacgccgcgctgggcctggctgtcg
ccggagcaccaggcgcgcgaggacgtcgtcgccgtgcccgacaagctgggcctgccgctg
atcgtcaagccgccgcgcgagggctcgtcgatcggcatcaccaaggtcgccggctactcc
gagatgcaggacgcggtgaagctggcctccgagtacgacgccgacgtgctctgcgaggag
ttcatcgacggcatcgaggtcacctgcgcggtgctcggcgaaggcgcctcggcgcgcgcg
ctgccggtgatccgcatcgtcgcgcccggcggcaactacgacttcgagcacaagtacttc
tccgaggagaccggctaccactgcccgagcggcctgccgccggccgaggaggccgagatc
cagcgcctgacgctggccgcctaccgcctgctcggctgccgcggctggggccgcgccgac
ttgatgatccgcgagagcgaccgcaagcccttcctgctggagatgaacaccagcccgggc
atgacgagccactcgctggtgccgctggccgcgcgcgtggccggcatgagctacgaacag
ctgtgcgtgcacgtgctcgagtgcgccgcgctggaccacccgggagtctga
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