KEGG   Rubrivivax gelatinosus: RGE_46700Help
Entry
RGE_46700         CDS       T01803                                 

Gene name
gatB
Definition
(GenBank) putative aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
rge  Rubrivivax gelatinosus
Pathway
rge00970  Aminoacyl-tRNA biosynthesis
rge01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rge00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RGE_46700 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rge03029]
    RGE_46700 (gatB)
Enzymes [BR:rge01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     RGE_46700 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     RGE_46700 (gatB)
Mitochondrial biogenesis [BR:rge03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    RGE_46700 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey
Motif
Other DBs
NCBI-ProteinID: BAL98003
UniProt: I0HYB6
LinkDB All DBs
Position
5002328..5003779
Genome map
AA seq 483 aa AA seqDB search
MATFPLIRGYEVVIGFETHAQLSTESKIFSGASTRFGAEPNTQACPVDLALPGTLPVANR
GAVERAIRFGLAVGAKVAPLSIFARKNYFYPDLPKGYQISQYEIPVVQGGSVSFLLDGEK
RSVRLTRAHLEEDAGKSLHEDYHGQSGIDLNRAGTPLLEIVSEPDLRSSAEAVEYAKALH
ALVVWLGICDGNMQEGSFRCDANVSVRRPGEPFGTRREIKNLNSFRFLQQAIDFEVQWQI
DRLEDGLAIEQATVLFNPDTGETRAMRSKEDAHDYRYFPDPDLPPLVIAPDWVERVRAAM
PELPALMAERFQRDDGLPAYDAAMMTQSLAFARYYEAARDGCGQPKLVANWLMGEISKRL
NSEGVAIDAAPVGPETLAKLIGRIADGTVSNNGARQVFDALWSGEAAEVDAVIEAKGLKQ
MNDSGALEKIVDEVIAANAKSVEEFRAGKDKAFNALVGQVMKASKGKANPAQASELLRRK
LGG
NT seq 1452 nt NT seq  +upstreamnt  +downstreamnt
atggcgacgttccccctcatccgcggctacgaagtcgtcatcggcttcgagacccatgcc
cagctctccaccgagagcaagatcttcagcggcgcctcgacgcgtttcggcgccgagccc
aacacccaggcctgcccggtcgacctggcgctgcccggcacgctgccggtggccaaccgc
ggcgccgtcgaacgcgcgatccgcttcggcctggccgtcggcgccaaggtcgcgccgctg
tcgatcttcgcgcgcaagaactacttctatcccgacctgcccaagggctaccagatcagc
cagtacgagatcccggtggtgcagggcggcagcgtctccttcctgctcgacggcgagaag
cgttcggtgcggctgacccgcgcccacctcgaggaagacgcgggcaagagcctgcacgag
gactaccacggccagtcgggcatcgacctgaaccgcgccggcacgccgctcctggagatc
gtctccgagcccgacctgcgcagctcggccgaggcggtggagtacgccaaggcgctgcac
gcgctcgtcgtctggctgggcatctgcgacggcaacatgcaggaaggcagcttccgctgc
gacgccaacgtctcggtgcgccgccccggcgagcctttcggcacgcgccgcgagatcaag
aacctcaacagcttccgcttcctgcagcaggccatcgacttcgaggtccagtggcagatc
gaccggctcgaagacggcctcgcgatcgagcaggcgacggtgctgttcaaccccgacacc
ggcgagacgcgggcgatgcgcagcaaggaagacgcgcacgactaccgctacttccccgac
cccgatctgccgccgctggtcatcgcgcccgactgggtggaacgcgtgcgcgccgcgatg
cccgagctgccggcgctgatggccgaacgcttccagcgcgacgacggcctgccggcctac
gacgcggcgatgatgacccagagcctggccttcgcgcgctactacgaggcggcgcgcgac
ggctgcggccagcccaagctggtcgccaactggctgatgggcgagatcagcaagcggctg
aactccgaaggcgtggcgatcgacgccgcgccggtgggcccagagacgctggccaagctg
atcggccgcatcgccgacggcacggtgtccaacaacggcgcgcgccaggtcttcgacgcg
ctgtggagcggcgaggccgccgaggtcgacgccgtcatcgaggccaagggcctcaagcag
atgaacgacagcggcgcgctggagaagatcgtcgacgaggtgattgccgccaacgccaag
tcggtcgaggagttccgcgccggcaaggacaaggccttcaacgcgctggtcggccaggtc
atgaaggccagcaagggcaaggccaatccggcgcaggccagcgaactgctgcgccgcaag
ctcggcggctga

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