Roseomonas gilardii: RGI145_00230
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Entry
RGI145_00230 CDS
T04615
Name
(GenBank) dicarboxylate--CoA ligase PimA
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi00061
Fatty acid biosynthesis
rgi00071
Fatty acid degradation
rgi01100
Metabolic pathways
rgi01212
Fatty acid metabolism
rgi02024
Quorum sensing
Module
rgi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RGI145_00230
00071 Fatty acid degradation
RGI145_00230
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RGI145_00230
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rgi01004
]
RGI145_00230
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rgi04147
]
RGI145_00230
Enzymes [BR:
rgi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RGI145_00230
Lipid biosynthesis proteins [BR:
rgi01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
RGI145_00230
Exosome [BR:
rgi04147
]
Exosomal proteins
Exosomal proteins of breast milk
RGI145_00230
Exosomal proteins of breast cancer cells
RGI145_00230
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
APT58957
UniProt:
A0A1L7AJH8
LinkDB
All DBs
Position
1:complement(53520..55199)
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AA seq
559 aa
AA seq
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MRHPWMESFPDLCDWTAPLEITTLPELLATAVAHRGAAPALEFRGHVLSYEALGKEVERL
ASGFAASGIGHGDNVALLLPNTAYHPVSFFALTRLGARVVHISALDARREIIHKLEATQS
RRIVTTNLPGFLPSALDMLDAHIVDEVIVGDDSRYGVGEVAALPIPHRAGVREMSGLLSD
APVTAALPSVDDIAVLQFTGGTTGLPKAAMLSHGNLTSAVSMYRLWQDGSRPLIPGAEKV
IAVLPLFHIYALTTVLLRHLRDGNQILLRQRFDVETLIRDVAELKASQFSGVPTMWVSLL
NRPGVEAVDFSSLKSCVSGGAPLPFEVQARIEAIIGNQLNNGWGMTETGPAGSRVPYRTP
RRPGLIGAPLPGLAMRIVSQDDPSQELKPGDVGEIAIRGPNVFKGYLNDEAGTAAAFRDG
WFLTGDMGRMDDTGLFEIVDRRKNMIISSGFNVYPAVIENAIYEHPSVEEVIVIGVPDSY
RGQSAKAYLKLKAGAATFSLEELMEFLADRLGRHEMPRAIEFREALPRSPVGKLLPKVLL
AEIAAAADTPSATTMDRNH
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
gtgcgccatccatggatggagagctttccggatctctgcgactggaccgcgccactggag
atcaccaccctgcccgagctcctggcgacggccgtcgcccatcgcggcgcggcgccggct
ctggagttccgcggccatgtgctgagctacgaggccctcgggaaggaggtcgagcgcctc
gcgagcggcttcgcggcctcggggatcgggcatggggacaatgtggcgctcctgcttccg
aacaccgcgtatcatccggtctccttcttcgccctgacgcggctcggggcgagggtcgtg
catatcagcgccctggatgcccgccgggagatcatccacaagctggaagcgacgcagagc
cgccgcatcgtcacgaccaacctcccgggcttcctgcccagtgcgctggacatgctggac
gcgcacatcgtggacgaggttatcgtcggggatgacagccggtatggcgtgggcgaagtc
gccgccctgcccatcccacatcgggcgggtgttcgggagatgtcgggccttctcagcgat
gcgcccgtcacggcggcacttccgtccgtcgatgacatcgccgtgctgcagttcacgggc
ggaaccaccggcctgccgaaagccgccatgctgagccatggcaacctgacatcggcggtg
agcatgtatcgcctctggcaggacggcagccggccgctcatccccggagcggaaaaggtc
attgccgtcctgccgctgttccacatctatgcgctgaccaccgtgctcctgcgccacctg
cgcgacggcaaccagatccttcttcgccagcgcttcgatgtcgagacgctgatccgggac
gtggcggagctgaaggccagccagttctccggcgtgcccaccatgtgggtgtcgctgctg
aaccggccgggcgtcgaggcggtggacttctcctccctcaaatcctgcgtctcgggtggc
gcgcccttgccgttcgaggtgcaggcaaggatcgaggccatcatcggcaaccagttgaac
aatggctggggcatgacggagaccggacccgcgggatcccgcgtgccctatcgcacgccg
cgccggcccgggctgatcggtgcgccacttcccgggctcgcgatgcgcatcgtgtcccag
gacgatccctctcaggagttgaagcccggggatgtcggggaaatcgccatccgtggcccc
aacgtgttcaagggctacctgaatgacgaggcgggaacggcggcggcctttcgggatggc
tggttccttaccggcgacatggggcgcatggacgatacgggtctcttcgagatcgtggat
cgccgcaagaacatgatcatctcatccggcttcaacgtgtatccggcggtgatcgagaac
gcgatctacgagcatccatccgtcgaggaggtgatcgtcatcggcgtaccggacagctat
cgcgggcaatcggcgaaggcctatctgaagctcaaggcgggagccgccaccttctccctg
gaagaactgatggaattcctggcggaccgtctcggacgtcacgagatgccgcgcgccatc
gaattccgcgaggcgctgccgcgcagccccgtcggcaagctgctgccgaaggtgctcctc
gccgagatcgccgccgcggcggatacgccatccgccaccaccatggaccggaatcactga
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