Roseomonas gilardii: RGI145_05605
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Entry
RGI145_05605 CDS
T04615
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
rgi
Roseomonas gilardii
Pathway
rgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RGI145_05605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rgi03019
]
RGI145_05605
Messenger RNA biogenesis [BR:
rgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RGI145_05605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
NACHT
Motif
Other DBs
NCBI-ProteinID:
APT56660
UniProt:
A0A1L7AD61
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All DBs
Position
1:complement(1276862..1278277)
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AA seq
471 aa
AA seq
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MTDFLTLGLASPILRALDEEGYTTPTPIQAQAIPAAMEGRDVLGIAQTGTGKTAAFALPL
LHRLIMDKRRAPPTGCRALILSPTRELAAQIHDSIKAYGRHLGLRSALIFGGVPENPQRR
ALSGGVDIIVATPGRLLDHIGTRNCRLDSLEAFILDEADQMLDRGFWPAIRRISGMLPKQ
RHTMFFSATMPEAIASLAKDLLREPVKVEVTPVATTAERVNQRAIHVSRDGKRTVLADIL
RKPEVGRTLVFSRTKHGADRIVKQLEQDGLAANAIHGNKSQGQRERALDAFKRGTAPILV
ATDIAARGIDVSGVTHVIQYDLPEVPETYVHRIGRTARAGASGEAIALVSLDDVPLLRAV
EKLTRQAVPAEGDIPTGPVPRAPGRQQNRGRGGQGRPGGAPRPAGGHGAGGSGRGDARRP
QFAGDRKPAGGHRPHGESRDRRADHARPEGEAKSRSWRDSDFRDTDRSGTR
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatttcctgaccctcggcctcgcgtcgcccatcctgcgcgcgctggacgaagag
ggctacaccaccccgaccccgatccaggcccaggccatcccggccgccatggaagggcgg
gatgtgctgggcatcgcccagaccggcaccggcaagaccgcggccttcgcgctgccgctg
ctgcaccgcctgatcatggacaagcgccgcgcgccgccgaccggctgccgcgcgctgatc
ctgtcgccgacgcgcgagctggcggcgcagatccatgacagcatcaaggcctatggccgc
cacctgggcctgcgcagcgcgctgatcttcggcggcgttccggagaacccgcagcgccgc
gcgctgtcgggcggcgtggacatcatcgtcgccacgccgggccgcctgctggaccatatc
ggcacgcgcaactgccggctggattcgctggaggccttcatcctggatgaggccgaccag
atgctggaccggggcttctggcccgcgatccgccgcatctcggggatgctgccgaagcag
cgccacacgatgttcttctccgccaccatgccggaggccatcgcctcgctcgccaaggac
ctgctgcgcgagccggtgaaggtcgaggtcacgcccgtcgccaccacggcggagcgggtg
aaccagcgcgccatccatgtgagccgcgacggcaagcgcacggtgctggccgacatcctc
cgcaagccggaggtcgggcgcaccctggtcttctcccgcaccaagcacggcgccgaccgc
atcgtgaagcagctggagcaggacgggctcgccgccaacgcgatccatggcaacaagagc
cagggccagcgtgagcgcgcgctcgacgccttcaagcgcggcacggcgccgatcctggtc
gcgaccgacatcgccgcgcgcggcatcgacgtgtccggcgtgacgcatgtgatccagtac
gacctgccggaagtgccggagacctatgtccaccgcatcggccgcaccgcgcgcgccggc
gcctcgggcgaggccatcgccctggtgtcgctggacgacgtgccgctgctgcgcgcggtc
gagaagctgacgcgccaggcggtgccggccgagggcgacatcccgaccggcccggtgccg
cgtgcccccgggcgccagcagaaccgcggccgtggcggccagggccgccccggcggcgcg
ccccgcccggcgggtgggcatggtgccggcggcagcggccgcggcgatgcccgccgcccg
cagttcgcgggcgaccgtaagccggcgggcggccatcgcccgcatggcgagagccgcgac
cgtcgcgccgatcacgcgcgccccgagggcgaggccaagagccgctcctggcgggacagc
gatttccgcgacacggaccgttccggcacgcgctga
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