Rhodanobacter glycinis: CS053_14855
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Entry
CS053_14855 CDS
T06136
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rgl
Rhodanobacter glycinis
Pathway
rgl00521
Streptomycin biosynthesis
rgl00523
Polyketide sugar unit biosynthesis
rgl00525
Acarbose and validamycin biosynthesis
rgl00541
O-Antigen nucleotide sugar biosynthesis
rgl01100
Metabolic pathways
rgl01110
Biosynthesis of secondary metabolites
rgl01250
Biosynthesis of nucleotide sugars
Module
rgl_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rgl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
CS053_14855 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CS053_14855 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CS053_14855 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CS053_14855 (rfbB)
00525 Acarbose and validamycin biosynthesis
CS053_14855 (rfbB)
Enzymes [BR:
rgl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CS053_14855 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
Motif
Other DBs
NCBI-ProteinID:
QEE25639
UniProt:
A0A5B9E1S5
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All DBs
Position
complement(3342761..3343831)
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AA seq
356 aa
AA seq
DB search
MSYPIISATTLLVTGGAGFIGANFVLQAVADGLRVVNLDKLTYAGNLDTLASLQGNDRHV
FVQGDIGDRALVAKLLAEYRPDAIVNFAAESHVDRSIDGPAEFVQTNVVGTLGLLECARD
YWRGLEGTAREAFRFLHVSTDEVYGSLGDEGQFTETTAYAPNSPYSASKAASDHLVRAFH
HTYGLPVLTTNCSNNYGPYQFPEKLIPLVTAKALAGEALPVYGDGLNIRDWLFVGDHCSA
IRRVLDAGRVGETYNVGGNAERTNITVVKTICALLDQRRPLADGRARESLITYVKDRPGH
DRRYAIDSSKLQRELGWKPSQTFESGIAATLDWYLDHQPWVQRVLDGSYRMERLGQ
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagttatccaatcatcagcgccaccacccttctcgtcaccggcggcgccggcttcatc
ggcgcaaatttcgtgctgcaggcggttgccgacggcctgcgcgtggtgaacctggacaag
ctcacctacgccggcaacctcgacacgttggcttcgttgcagggcaatgaccggcacgtg
ttcgtgcagggcgacatcggcgaccgggcgctggtggcgaagctgctggccgagtaccgc
cccgacgcgatcgtgaattttgctgccgagtcgcacgtggaccgctccatcgacggcccg
gccgaattcgtgcagaccaacgtggtcggcaccctgggcctgctggaatgcgcccgcgac
tactggcgcggtctcgaaggcacggcccgcgaggcgttccgctttctgcacgtctccacc
gacgaggtctacggctcgctgggcgacgagggccaattcaccgaaaccaccgcctacgcg
cccaattcgccctactcggcgtccaaggccgcctccgaccatctggtccgcgcgttccac
catacctacgggctgccggtgctgaccaccaactgctcgaacaattacgggccgtaccag
ttccccgaaaagctcattccgctggtgaccgccaaggcgctggccggcgaagcgttaccg
gtttatggcgacggcctgaacatccgcgactggctgttcgtgggtgaccactgctcggcg
atccgccgcgtgctggacgccggccgcgtgggtgaaacctacaacgtgggcggcaatgcc
gagcgcaccaacatcaccgtggtgaagaccatctgcgccctgctcgaccagcgccgcccg
ctggccgatggccgtgcccgcgagtcgctgatcacctatgtgaaggaccgccccggccac
gaccgtcgctacgccatcgactcgtccaagttgcagcgcgagctgggctggaagccgtcg
cagaccttcgagagcggcatcgcggccacgctggactggtatctcgaccatcaaccgtgg
gtacaacgcgtactcgacggcagctatcgcatggagcgactgggacaatga
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